Gene : Cagra.2117s0055 C. grandiflora v1.1
Defline:  (1 of 3) PTHR26374:SF192 - C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN-RELATED Genomic Order:  55
Name:  ? Cagra.2117s0055 Secondary Identifier:  ? PAC:28905573
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2117s0055 0.5kb upstream 0.5kb upstream 1181 true Scaffold2117: 209906-211086 Capsella grandiflora
Cagra.2117s0055 0.5kb upstream 0.5kb upstream 500 false Scaffold2117: 209906-210405 Capsella grandiflora
Cagra.2117s0055 0.5kb downstream 0.5kb downstream 1181 true Scaffold2117: 210406-211586 Capsella grandiflora
Cagra.2117s0055 0.5kb downstream 0.5kb downstream 500 false Scaffold2117: 211087-211586 Capsella grandiflora
Cagra.2117s0055 1.0kb upstream 1.0kb upstream 1681 true Scaffold2117: 209406-211086 Capsella grandiflora
Cagra.2117s0055 1.0kb upstream 1.0kb upstream 1000 false Scaffold2117: 209406-210405 Capsella grandiflora
Cagra.2117s0055 1.0kb downstream 1.0kb downstream 1681 true Scaffold2117: 210406-212086 Capsella grandiflora
Cagra.2117s0055 1.0kb downstream 1.0kb downstream 1000 false Scaffold2117: 211087-212086 Capsella grandiflora
Cagra.2117s0055 2.0kb upstream 2.0kb upstream 2681 true Scaffold2117: 208406-211086 Capsella grandiflora
Cagra.2117s0055 2.0kb upstream 2.0kb upstream 2000 false Scaffold2117: 208406-210405 Capsella grandiflora
Cagra.2117s0055 2.0kb downstream 2.0kb downstream 2681 true Scaffold2117: 210406-213086 Capsella grandiflora
Cagra.2117s0055 2.0kb downstream 2.0kb downstream 2000 false Scaffold2117: 211087-213086 Capsella grandiflora
Cagra.2117s0055 5.0kb upstream 5.0kb upstream 5681 true Scaffold2117: 205406-211086 Capsella grandiflora
Cagra.2117s0055 5.0kb upstream 5.0kb upstream 5000 false Scaffold2117: 205406-210405 Capsella grandiflora
Cagra.2117s0055 5.0kb downstream 5.0kb downstream 5681 true Scaffold2117: 210406-216086 Capsella grandiflora
Cagra.2117s0055 5.0kb downstream 5.0kb downstream 5000 false Scaffold2117: 211087-216086 Capsella grandiflora
Cagra.2117s0055 10.0kb upstream 10.0kb upstream 10681 true Scaffold2117: 200406-211086 Capsella grandiflora
Cagra.2117s0055 10.0kb upstream 10.0kb upstream 10000 false Scaffold2117: 200406-210405 Capsella grandiflora
Cagra.2117s0055 10.0kb downstream 10.0kb downstream 10681 true Scaffold2117: 210406-221086 Capsella grandiflora
Cagra.2117s0055 10.0kb downstream 10.0kb downstream 10000 false Scaffold2117: 211087-221086 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365272 5261 Brassicaceae View MSA
123836301 5264 Brassicales-Malvales View MSA
124350087 5266 SBM View MSA
124246580 5268 Malvidae View MSA
124072849 5270 Rosid View MSA
123747736 5271 Pentapetalae View MSA
122788735 5272 Eudicot View MSA
122049526 5273 Angiosperm View MSA
121348741 5274 Embryophyte View MSA
123380998 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain