Gene : Cagra.2238s0083 C. grandiflora v1.1
Defline:  (1 of 27) PF05553 - Cotton fibre expressed protein (DUF761) Genomic Order:  83
Name:  ? Cagra.2238s0083 Secondary Identifier:  ? PAC:28918221
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Ontology Annotation Displayer

0 Pathways

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2238s0083 0.5kb upstream 0.5kb upstream 728 true Scaffold2238: 262433-263160 Capsella grandiflora
Cagra.2238s0083 0.5kb upstream 0.5kb upstream 500 false Scaffold2238: 262433-262932 Capsella grandiflora
Cagra.2238s0083 0.5kb downstream 0.5kb downstream 728 true Scaffold2238: 262933-263660 Capsella grandiflora
Cagra.2238s0083 0.5kb downstream 0.5kb downstream 500 false Scaffold2238: 263161-263660 Capsella grandiflora
Cagra.2238s0083 1.0kb upstream 1.0kb upstream 1228 true Scaffold2238: 261933-263160 Capsella grandiflora
Cagra.2238s0083 1.0kb upstream 1.0kb upstream 1000 false Scaffold2238: 261933-262932 Capsella grandiflora
Cagra.2238s0083 1.0kb downstream 1.0kb downstream 1228 true Scaffold2238: 262933-264160 Capsella grandiflora
Cagra.2238s0083 1.0kb downstream 1.0kb downstream 1000 false Scaffold2238: 263161-264160 Capsella grandiflora
Cagra.2238s0083 2.0kb upstream 2.0kb upstream 2228 true Scaffold2238: 260933-263160 Capsella grandiflora
Cagra.2238s0083 2.0kb upstream 2.0kb upstream 2000 false Scaffold2238: 260933-262932 Capsella grandiflora
Cagra.2238s0083 2.0kb downstream 2.0kb downstream 2228 true Scaffold2238: 262933-265160 Capsella grandiflora
Cagra.2238s0083 2.0kb downstream 2.0kb downstream 2000 false Scaffold2238: 263161-265160 Capsella grandiflora
Cagra.2238s0083 5.0kb upstream 5.0kb upstream 5228 true Scaffold2238: 257933-263160 Capsella grandiflora
Cagra.2238s0083 5.0kb upstream 5.0kb upstream 5000 false Scaffold2238: 257933-262932 Capsella grandiflora
Cagra.2238s0083 5.0kb downstream 5.0kb downstream 5228 true Scaffold2238: 262933-268160 Capsella grandiflora
Cagra.2238s0083 5.0kb downstream 5.0kb downstream 5000 false Scaffold2238: 263161-268160 Capsella grandiflora
Cagra.2238s0083 10.0kb upstream 10.0kb upstream 10228 true Scaffold2238: 252933-263160 Capsella grandiflora
Cagra.2238s0083 10.0kb upstream 10.0kb upstream 10000 false Scaffold2238: 252933-262932 Capsella grandiflora
Cagra.2238s0083 10.0kb downstream 10.0kb downstream 10228 true Scaffold2238: 262933-273160 Capsella grandiflora
Cagra.2238s0083 10.0kb downstream 10.0kb downstream 10000 false Scaffold2238: 263161-273160 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369122 5261 Brassicaceae View MSA
123840805 5264 Brassicales-Malvales View MSA
124348914 5266 SBM View MSA
124244692 5268 Malvidae View MSA
124069839 5270 Rosid View MSA
123746410 5271 Pentapetalae View MSA
122795069 5272 Eudicot View MSA
122048129 5273 Angiosperm View MSA
121310856 5274 Embryophyte View MSA
123348241 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain