Gene : Cagra.2230s0008 C. grandiflora v1.1
Defline:  (1 of 11) PF01535//PF13041//PF13812//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) // DYW family of nucleic acid deaminases (DYW_deaminase) Genomic Order:  8
Name:  ? Cagra.2230s0008 Secondary Identifier:  ? PAC:28906048
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2230s0008 0.5kb upstream 0.5kb upstream 2393 true Scaffold2230: 20430-22822 Capsella grandiflora
Cagra.2230s0008 0.5kb upstream 0.5kb upstream 500 false Scaffold2230: 20430-20929 Capsella grandiflora
Cagra.2230s0008 0.5kb downstream 0.5kb downstream 2393 true Scaffold2230: 20930-23322 Capsella grandiflora
Cagra.2230s0008 0.5kb downstream 0.5kb downstream 500 false Scaffold2230: 22823-23322 Capsella grandiflora
Cagra.2230s0008 1.0kb upstream 1.0kb upstream 2893 true Scaffold2230: 19930-22822 Capsella grandiflora
Cagra.2230s0008 1.0kb upstream 1.0kb upstream 1000 false Scaffold2230: 19930-20929 Capsella grandiflora
Cagra.2230s0008 1.0kb downstream 1.0kb downstream 2893 true Scaffold2230: 20930-23822 Capsella grandiflora
Cagra.2230s0008 1.0kb downstream 1.0kb downstream 1000 false Scaffold2230: 22823-23822 Capsella grandiflora
Cagra.2230s0008 2.0kb upstream 2.0kb upstream 3893 true Scaffold2230: 18930-22822 Capsella grandiflora
Cagra.2230s0008 2.0kb upstream 2.0kb upstream 2000 false Scaffold2230: 18930-20929 Capsella grandiflora
Cagra.2230s0008 2.0kb downstream 2.0kb downstream 3893 true Scaffold2230: 20930-24822 Capsella grandiflora
Cagra.2230s0008 2.0kb downstream 2.0kb downstream 2000 false Scaffold2230: 22823-24822 Capsella grandiflora
Cagra.2230s0008 5.0kb upstream 5.0kb upstream 6893 true Scaffold2230: 15930-22822 Capsella grandiflora
Cagra.2230s0008 5.0kb upstream 5.0kb upstream 5000 false Scaffold2230: 15930-20929 Capsella grandiflora
Cagra.2230s0008 5.0kb downstream 5.0kb downstream 3916 true Scaffold2230: 20930-24845 Capsella grandiflora
Cagra.2230s0008 5.0kb downstream 5.0kb downstream 2023 false Scaffold2230: 22823-24845 Capsella grandiflora
Cagra.2230s0008 10.0kb upstream 10.0kb upstream 11893 true Scaffold2230: 10930-22822 Capsella grandiflora
Cagra.2230s0008 10.0kb upstream 10.0kb upstream 10000 false Scaffold2230: 10930-20929 Capsella grandiflora
Cagra.2230s0008 10.0kb downstream 10.0kb downstream 3916 true Scaffold2230: 20930-24845 Capsella grandiflora
Cagra.2230s0008 10.0kb downstream 10.0kb downstream 2023 false Scaffold2230: 22823-24845 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371247 5261 Brassicaceae View MSA
123834152 5264 Brassicales-Malvales View MSA
124337557 5266 SBM View MSA
124241237 5268 Malvidae View MSA
124067104 5270 Rosid View MSA
123738274 5271 Pentapetalae View MSA
122790964 5272 Eudicot View MSA
122051669 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351733 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain