Gene : Cagra.2231s0001 C. grandiflora v1.1
Defline:  (1 of 132) PF00847 - AP2 domain (AP2) Genomic Order:  1
Name:  ? Cagra.2231s0001 Secondary Identifier:  ? PAC:28900264
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Ontology Annotation Displayer

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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2231s0001 0.5kb upstream 0.5kb upstream 1418 true Scaffold2231: 40-1457 Capsella grandiflora
Cagra.2231s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold2231: 958-1457 Capsella grandiflora
Cagra.2231s0001 0.5kb downstream 0.5kb downstream 957 true Scaffold2231: 1-957 Capsella grandiflora
Cagra.2231s0001 0.5kb downstream 0.5kb downstream 39 false Scaffold2231: 1-39 Capsella grandiflora
Cagra.2231s0001 1.0kb upstream 1.0kb upstream 1918 true Scaffold2231: 40-1957 Capsella grandiflora
Cagra.2231s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold2231: 958-1957 Capsella grandiflora
Cagra.2231s0001 1.0kb downstream 1.0kb downstream 957 true Scaffold2231: 1-957 Capsella grandiflora
Cagra.2231s0001 1.0kb downstream 1.0kb downstream 39 false Scaffold2231: 1-39 Capsella grandiflora
Cagra.2231s0001 2.0kb upstream 2.0kb upstream 2918 true Scaffold2231: 40-2957 Capsella grandiflora
Cagra.2231s0001 2.0kb upstream 2.0kb upstream 2000 false Scaffold2231: 958-2957 Capsella grandiflora
Cagra.2231s0001 2.0kb downstream 2.0kb downstream 957 true Scaffold2231: 1-957 Capsella grandiflora
Cagra.2231s0001 2.0kb downstream 2.0kb downstream 39 false Scaffold2231: 1-39 Capsella grandiflora
Cagra.2231s0001 5.0kb upstream 5.0kb upstream 5918 true Scaffold2231: 40-5957 Capsella grandiflora
Cagra.2231s0001 5.0kb upstream 5.0kb upstream 5000 false Scaffold2231: 958-5957 Capsella grandiflora
Cagra.2231s0001 5.0kb downstream 5.0kb downstream 957 true Scaffold2231: 1-957 Capsella grandiflora
Cagra.2231s0001 5.0kb downstream 5.0kb downstream 39 false Scaffold2231: 1-39 Capsella grandiflora
Cagra.2231s0001 10.0kb upstream 10.0kb upstream 10918 true Scaffold2231: 40-10957 Capsella grandiflora
Cagra.2231s0001 10.0kb upstream 10.0kb upstream 10000 false Scaffold2231: 958-10957 Capsella grandiflora
Cagra.2231s0001 10.0kb downstream 10.0kb downstream 957 true Scaffold2231: 1-957 Capsella grandiflora
Cagra.2231s0001 10.0kb downstream 10.0kb downstream 39 false Scaffold2231: 1-39 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360996 5261 Brassicaceae View MSA
123837170 5264 Brassicales-Malvales View MSA
124322253 5266 SBM View MSA
124251018 5268 Malvidae View MSA
124069333 5270 Rosid View MSA
123742197 5271 Pentapetalae View MSA
122797344 5272 Eudicot View MSA
122048706 5273 Angiosperm View MSA
123428898 5275 Viridiplantae View MSA
121351000 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain