Protein Family : Integrase-type DNA-binding superfamily protein 124251018

Method ID:  5268 Method Name:  Malvidae
Sequence Alignment:  View MSA Member Count:  33

33 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
29792.t000008 (1 of 113) PF00847 - AP2 domain (AP2) R. communis v0.1 1317   29792: 45244-46560
orange1.1g046538m.g (1 of 119) PF00847 - AP2 domain (AP2) C. sinensis v1.1 1290   scaffold00003: 1341024-1342313
AT1G12980 (1 of 3) PTHR31677//PTHR31677:SF17 - FAMILY NOT NAMED // ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 10-RELATED A. thaliana TAIR10 ESR1 1248   Chr1: 4429718-4430965
AT1G24590 (1 of 141) PF00847 - AP2 domain (AP2) A. thaliana TAIR10 DRNL 921   Chr1: 8714389-8715309
Thhalv10008321m.g (1 of 136) PF00847 - AP2 domain (AP2) E. salsugineum v1.0 1017   scaffold_5: 6012912-6013928
Thhalv10009647m.g (1 of 2) PTHR31677:SF17 - ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 10-RELATED E. salsugineum v1.0 894   scaffold_5: 11108718-11109611
Ciclev10031612m.g (1 of 128) PF00847 - AP2 domain (AP2) C. clementina v1.0 1404   scaffold_4: 22198788-22200191
Lus10017907.g (1 of 230) PF00847 - AP2 domain (AP2) L. usitatissimum v1.0 819   scaffold35: 673943-674761
Lus10035076.g (1 of 230) PF00847 - AP2 domain (AP2) L. usitatissimum v1.0 951   scaffold43: 411352-412302
Gorai.002G187500 (1 of 258) PF00847 - AP2 domain (AP2) G. raimondii v2.1 1807   Chr02: 50093807-50095613
Gorai.005G177900 (1 of 258) PF00847 - AP2 domain (AP2) G. raimondii v2.1 1248   Chr05: 52165625-52166872
Gorai.008G161000 (1 of 258) PF00847 - AP2 domain (AP2) G. raimondii v2.1 1216   Chr08: 42763812-42765027
Thecc1EG010540 (1 of 119) PF00847 - AP2 domain (AP2) T. cacao v1.1 2375   scaffold_2: 34204370-34206744
Cagra.2231s0001 (1 of 132) PF00847 - AP2 domain (AP2) C. grandiflora v1.1 918   Scaffold2231: 40-957
Cagra.0568s0219 (1 of 1) PTHR31677:SF17 - ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 10-RELATED C. grandiflora v1.1 996   Scaffold568: 740314-741309
Brara.F00821 (1 of 5) PTHR31677:SF17 - ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 10-RELATED B. rapa FPsc v1.3 975   A06: 4634848-4635822
Brara.H02084 (1 of 279) PF00847 - AP2 domain (AP2) B. rapa FPsc v1.3 906   A08: 18679367-18680272
Brara.I05083 (1 of 5) PTHR31677:SF17 - ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 10-RELATED B. rapa FPsc v1.3 888   A09: 42073655-42074542
Bostr.13671s0153 (1 of 2) PTHR31677:SF17 - ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 10-RELATED B. stricta v1.2 978   Scaffold13671: 835823-836800
Bostr.15697s0023 (1 of 143) PF00847 - AP2 domain (AP2) B. stricta v1.2 915   Scaffold15697: 133676-134590
SapurV1A.0317s0220 (1 of 224) PF00847 - AP2 domain (AP2) S. purpurea v1.0 1257   chr10: 1965597-1966853
SapurV1A.2120s0040 (1 of 224) PF00847 - AP2 domain (AP2) S. purpurea v1.0 1257   Scaffold2120: 29381-30637
SapurV1A.0069s0280 (1 of 224) PF00847 - AP2 domain (AP2) S. purpurea v1.0 1251   chr08: 13314891-13316141
Manes.12G022600 (1 of 193) PF00847 - AP2 domain (AP2) M. esculenta v6.1 1245   Chromosome12: 1692315-1693559
Manes.13G023700 (1 of 193) PF00847 - AP2 domain (AP2) M. esculenta v6.1 1212   Chromosome13: 2246123-2247334
AL1G40320 (1 of 151) PF00847 - AP2 domain (AP2) A. lyrata v2.1 1200   scaffold_1: 11800570-11801769
AL1G24630 (1 of 4) PTHR31677:SF17 - ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 10-RELATED A. lyrata v2.1 1298   scaffold_1: 5383532-5384829
Potri.008G186300 (1 of 209) PF00847 - AP2 domain (AP2) P. trichocarpa v3.1 1266   Chr08: 12807248-12808513
Potri.010G046600 (1 of 209) PF00847 - AP2 domain (AP2) P. trichocarpa v3.1 1821   Chr10: 7787369-7789189
Podel.08G215500 (1 of 223) PF00847 - AP2 domain (AP2) P. deltoides WV94 v2.1 1648   Chr08: 15427247-15428894

33 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
29792.m000600 R. communis v0.1 124251018 Integrase-type DNA-binding superfamily protein 1 5268 Malvidae
AT1G12980.1 A. thaliana TAIR10 124251018 Integrase-type DNA-binding superfamily protein 2 5268 Malvidae
Thhalv10008321m E. salsugineum v1.0 124251018 Integrase-type DNA-binding superfamily protein 2 5268 Malvidae
Ciclev10031612m C. clementina v1.0 124251018 Integrase-type DNA-binding superfamily protein 1 5268 Malvidae
Gorai.005G177900.1 G. raimondii v2.1 124251018 Integrase-type DNA-binding superfamily protein 3 5268 Malvidae
Brara.F00821.1.p B. rapa FPsc v1.3 124251018 Integrase-type DNA-binding superfamily protein 3 5268 Malvidae
Carub.0001s1274.1.p C. rubella v1.1 124251018 Integrase-type DNA-binding superfamily protein 2 5268 Malvidae
orange1.1g046538m C. sinensis v1.1 124251018 Integrase-type DNA-binding superfamily protein 1 5268 Malvidae
AT1G24590.1 A. thaliana TAIR10 124251018 Integrase-type DNA-binding superfamily protein 2 5268 Malvidae
Thhalv10009647m E. salsugineum v1.0 124251018 Integrase-type DNA-binding superfamily protein 2 5268 Malvidae
Lus10035076 L. usitatissimum v1.0 124251018 Integrase-type DNA-binding superfamily protein 2 5268 Malvidae
Lus10017907 L. usitatissimum v1.0 124251018 Integrase-type DNA-binding superfamily protein 2 5268 Malvidae
Gorai.008G161000.1 G. raimondii v2.1 124251018 Integrase-type DNA-binding superfamily protein 3 5268 Malvidae
Gorai.002G187500.1 G. raimondii v2.1 124251018 Integrase-type DNA-binding superfamily protein 3 5268 Malvidae
Thecc1EG010540t1 T. cacao v1.1 124251018 Integrase-type DNA-binding superfamily protein 1 5268 Malvidae
Cagra.0568s0219.1.p C. grandiflora v1.1 124251018 Integrase-type DNA-binding superfamily protein 2 5268 Malvidae
Cagra.2231s0001.1.p C. grandiflora v1.1 124251018 Integrase-type DNA-binding superfamily protein 2 5268 Malvidae
Brara.H02084.1.p B. rapa FPsc v1.3 124251018 Integrase-type DNA-binding superfamily protein 3 5268 Malvidae
Brara.I05083.1.p B. rapa FPsc v1.3 124251018 Integrase-type DNA-binding superfamily protein 3 5268 Malvidae
Bostr.15697s0023.1.p B. stricta v1.2 124251018 Integrase-type DNA-binding superfamily protein 2 5268 Malvidae
Bostr.13671s0153.1.p B. stricta v1.2 124251018 Integrase-type DNA-binding superfamily protein 2 5268 Malvidae
SapurV1A.0317s0220.1.p S. purpurea v1.0 124251018 Integrase-type DNA-binding superfamily protein 3 5268 Malvidae
SapurV1A.2120s0040.1.p S. purpurea v1.0 124251018 Integrase-type DNA-binding superfamily protein 3 5268 Malvidae
SapurV1A.0069s0280.1.p S. purpurea v1.0 124251018 Integrase-type DNA-binding superfamily protein 3 5268 Malvidae
Manes.12G022600.1.p M. esculenta v6.1 124251018 Integrase-type DNA-binding superfamily protein 2 5268 Malvidae
Manes.13G023700.1.p M. esculenta v6.1 124251018 Integrase-type DNA-binding superfamily protein 2 5268 Malvidae
AL1G40320.t1 A. lyrata v2.1 124251018 Integrase-type DNA-binding superfamily protein 2 5268 Malvidae
AL1G24630.t1 A. lyrata v2.1 124251018 Integrase-type DNA-binding superfamily protein 2 5268 Malvidae
Potri.010G046600.1.p P. trichocarpa v3.1 124251018 Integrase-type DNA-binding superfamily protein 2 5268 Malvidae
Potri.008G186300.1.p P. trichocarpa v3.1 124251018 Integrase-type DNA-binding superfamily protein 2 5268 Malvidae