Gene : AL1G40320 A. lyrata v2.1
Defline:  (1 of 151) PF00847 - AP2 domain (AP2) Genomic Order:  2867
Name:  ? AL1G40320 Secondary Identifier:  ? PAC:35935649
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL1G40320 0.5kb upstream 0.5kb upstream 1700   true scaffold_1: 11800070-11801769 Arabidopsis lyrata
AL1G40320 0.5kb upstream 0.5kb upstream 500   false scaffold_1: 11800070-11800569 Arabidopsis lyrata
AL1G40320 0.5kb downstream 0.5kb downstream 1700   true scaffold_1: 11800570-11802269 Arabidopsis lyrata
AL1G40320 0.5kb downstream 0.5kb downstream 500   false scaffold_1: 11801770-11802269 Arabidopsis lyrata
AL1G40320 1.0kb upstream 1.0kb upstream 2200   true scaffold_1: 11799570-11801769 Arabidopsis lyrata
AL1G40320 1.0kb upstream 1.0kb upstream 1000   false scaffold_1: 11799570-11800569 Arabidopsis lyrata
AL1G40320 1.0kb downstream 1.0kb downstream 2200   true scaffold_1: 11800570-11802769 Arabidopsis lyrata
AL1G40320 1.0kb downstream 1.0kb downstream 1000   false scaffold_1: 11801770-11802769 Arabidopsis lyrata
AL1G40320 2.0kb upstream 2.0kb upstream 3200   true scaffold_1: 11798570-11801769 Arabidopsis lyrata
AL1G40320 2.0kb upstream 2.0kb upstream 2000   false scaffold_1: 11798570-11800569 Arabidopsis lyrata
AL1G40320 2.0kb downstream 2.0kb downstream 3200   true scaffold_1: 11800570-11803769 Arabidopsis lyrata
AL1G40320 2.0kb downstream 2.0kb downstream 2000   false scaffold_1: 11801770-11803769 Arabidopsis lyrata
AL1G40320 5.0kb upstream 5.0kb upstream 6200   true scaffold_1: 11795570-11801769 Arabidopsis lyrata
AL1G40320 5.0kb upstream 5.0kb upstream 5000   false scaffold_1: 11795570-11800569 Arabidopsis lyrata
AL1G40320 5.0kb downstream 5.0kb downstream 6200   true scaffold_1: 11800570-11806769 Arabidopsis lyrata
AL1G40320 5.0kb downstream 5.0kb downstream 5000   false scaffold_1: 11801770-11806769 Arabidopsis lyrata
AL1G40320 10.0kb upstream 10.0kb upstream 11200   true scaffold_1: 11790570-11801769 Arabidopsis lyrata
AL1G40320 10.0kb upstream 10.0kb upstream 10000   false scaffold_1: 11790570-11800569 Arabidopsis lyrata
AL1G40320 10.0kb downstream 10.0kb downstream 11200   true scaffold_1: 11800570-11811769 Arabidopsis lyrata
AL1G40320 10.0kb downstream 10.0kb downstream 10000   false scaffold_1: 11801770-11811769 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360996 5261 Brassicaceae View MSA
123837170 5264 Brassicales-Malvales View MSA
124322253 5266 SBM View MSA
124251018 5268 Malvidae View MSA
124069333 5270 Rosid View MSA
123742197 5271 Pentapetalae View MSA
122797344 5272 Eudicot View MSA
122048706 5273 Angiosperm View MSA
123428898 5275 Viridiplantae View MSA
121351000 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain