Gene : Cagra.2350s0005 C. grandiflora v1.1
Defline:  (1 of 8) PF14364 - Domain of unknown function (DUF4408) (DUF4408) Genomic Order:  5
Name:  ? Cagra.2350s0005 Secondary Identifier:  ? PAC:28908727
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2350s0005 0.5kb upstream 0.5kb upstream 1672 true Scaffold2350: 11869-13540 Capsella grandiflora
Cagra.2350s0005 0.5kb upstream 0.5kb upstream 500 false Scaffold2350: 11869-12368 Capsella grandiflora
Cagra.2350s0005 0.5kb downstream 0.5kb downstream 1672 true Scaffold2350: 12369-14040 Capsella grandiflora
Cagra.2350s0005 0.5kb downstream 0.5kb downstream 500 false Scaffold2350: 13541-14040 Capsella grandiflora
Cagra.2350s0005 1.0kb upstream 1.0kb upstream 2172 true Scaffold2350: 11369-13540 Capsella grandiflora
Cagra.2350s0005 1.0kb upstream 1.0kb upstream 1000 false Scaffold2350: 11369-12368 Capsella grandiflora
Cagra.2350s0005 1.0kb downstream 1.0kb downstream 2172 true Scaffold2350: 12369-14540 Capsella grandiflora
Cagra.2350s0005 1.0kb downstream 1.0kb downstream 1000 false Scaffold2350: 13541-14540 Capsella grandiflora
Cagra.2350s0005 2.0kb upstream 2.0kb upstream 3172 true Scaffold2350: 10369-13540 Capsella grandiflora
Cagra.2350s0005 2.0kb upstream 2.0kb upstream 2000 false Scaffold2350: 10369-12368 Capsella grandiflora
Cagra.2350s0005 2.0kb downstream 2.0kb downstream 3172 true Scaffold2350: 12369-15540 Capsella grandiflora
Cagra.2350s0005 2.0kb downstream 2.0kb downstream 2000 false Scaffold2350: 13541-15540 Capsella grandiflora
Cagra.2350s0005 5.0kb upstream 5.0kb upstream 6172 true Scaffold2350: 7369-13540 Capsella grandiflora
Cagra.2350s0005 5.0kb upstream 5.0kb upstream 5000 false Scaffold2350: 7369-12368 Capsella grandiflora
Cagra.2350s0005 5.0kb downstream 5.0kb downstream 6172 true Scaffold2350: 12369-18540 Capsella grandiflora
Cagra.2350s0005 5.0kb downstream 5.0kb downstream 5000 false Scaffold2350: 13541-18540 Capsella grandiflora
Cagra.2350s0005 10.0kb upstream 10.0kb upstream 11172 true Scaffold2350: 2369-13540 Capsella grandiflora
Cagra.2350s0005 10.0kb upstream 10.0kb upstream 10000 false Scaffold2350: 2369-12368 Capsella grandiflora
Cagra.2350s0005 10.0kb downstream 10.0kb downstream 11172 true Scaffold2350: 12369-23540 Capsella grandiflora
Cagra.2350s0005 10.0kb downstream 10.0kb downstream 10000 false Scaffold2350: 13541-23540 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371018 5261 Brassicaceae View MSA
123839471 5264 Brassicales-Malvales View MSA
124345018 5266 SBM View MSA
124241724 5268 Malvidae View MSA
124074138 5270 Rosid View MSA
123749937 5271 Pentapetalae View MSA
122792999 5272 Eudicot View MSA
122042966 5273 Angiosperm View MSA
121310057 5274 Embryophyte View MSA
123347654 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain