Gene : Cagra.22465s0001 C. grandiflora v1.1
Defline:  (1 of 13) PF13963 - Transposase-associated domain (Transpos_assoc) Genomic Order:  1
Name:  ? Cagra.22465s0001 Secondary Identifier:  ? PAC:28919696
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.22465s0001 0.5kb upstream 0.5kb upstream 935 true Scaffold22465: 3837-4771 Capsella grandiflora
Cagra.22465s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold22465: 3837-4336 Capsella grandiflora
Cagra.22465s0001 0.5kb downstream 0.5kb downstream 935 true Scaffold22465: 4337-5271 Capsella grandiflora
Cagra.22465s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold22465: 4772-5271 Capsella grandiflora
Cagra.22465s0001 1.0kb upstream 1.0kb upstream 1435 true Scaffold22465: 3337-4771 Capsella grandiflora
Cagra.22465s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold22465: 3337-4336 Capsella grandiflora
Cagra.22465s0001 1.0kb downstream 1.0kb downstream 1435 true Scaffold22465: 4337-5771 Capsella grandiflora
Cagra.22465s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold22465: 4772-5771 Capsella grandiflora
Cagra.22465s0001 2.0kb upstream 2.0kb upstream 2435 true Scaffold22465: 2337-4771 Capsella grandiflora
Cagra.22465s0001 2.0kb upstream 2.0kb upstream 2000 false Scaffold22465: 2337-4336 Capsella grandiflora
Cagra.22465s0001 2.0kb downstream 2.0kb downstream 2435 true Scaffold22465: 4337-6771 Capsella grandiflora
Cagra.22465s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold22465: 4772-6771 Capsella grandiflora
Cagra.22465s0001 5.0kb upstream 5.0kb upstream 4771 true Scaffold22465: 1-4771 Capsella grandiflora
Cagra.22465s0001 5.0kb upstream 5.0kb upstream 4336 false Scaffold22465: 1-4336 Capsella grandiflora
Cagra.22465s0001 5.0kb downstream 5.0kb downstream 4238 true Scaffold22465: 4337-8574 Capsella grandiflora
Cagra.22465s0001 5.0kb downstream 5.0kb downstream 3803 false Scaffold22465: 4772-8574 Capsella grandiflora
Cagra.22465s0001 10.0kb upstream 10.0kb upstream 4771 true Scaffold22465: 1-4771 Capsella grandiflora
Cagra.22465s0001 10.0kb upstream 10.0kb upstream 4336 false Scaffold22465: 1-4336 Capsella grandiflora
Cagra.22465s0001 10.0kb downstream 10.0kb downstream 4238 true Scaffold22465: 4337-8574 Capsella grandiflora
Cagra.22465s0001 10.0kb downstream 10.0kb downstream 3803 false Scaffold22465: 4772-8574 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122334561 5261 Brassicaceae View MSA
123775381 5264 Brassicales-Malvales View MSA
124273791 5266 SBM View MSA
124129345 5268 Malvidae View MSA
124039032 5270 Rosid View MSA
123752947 5271 Pentapetalae View MSA
122774877 5272 Eudicot View MSA
122050110 5273 Angiosperm View MSA
121351710 5274 Embryophyte View MSA
123427809 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain