Gene : Cagra.2428s0005 C. grandiflora v1.1
Defline:  (1 of 3) PTHR24361:SF334 - MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 19-RELATED Genomic Order:  5
Name:  ? Cagra.2428s0005 Secondary Identifier:  ? PAC:28904732
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2428s0005 0.5kb upstream 0.5kb upstream 1532 true Scaffold2428: 19988-21519 Capsella grandiflora
Cagra.2428s0005 0.5kb upstream 0.5kb upstream 500 false Scaffold2428: 19988-20487 Capsella grandiflora
Cagra.2428s0005 0.5kb downstream 0.5kb downstream 1532 true Scaffold2428: 20488-22019 Capsella grandiflora
Cagra.2428s0005 0.5kb downstream 0.5kb downstream 500 false Scaffold2428: 21520-22019 Capsella grandiflora
Cagra.2428s0005 1.0kb upstream 1.0kb upstream 2032 true Scaffold2428: 19488-21519 Capsella grandiflora
Cagra.2428s0005 1.0kb upstream 1.0kb upstream 1000 false Scaffold2428: 19488-20487 Capsella grandiflora
Cagra.2428s0005 1.0kb downstream 1.0kb downstream 2032 true Scaffold2428: 20488-22519 Capsella grandiflora
Cagra.2428s0005 1.0kb downstream 1.0kb downstream 1000 false Scaffold2428: 21520-22519 Capsella grandiflora
Cagra.2428s0005 2.0kb upstream 2.0kb upstream 3032 true Scaffold2428: 18488-21519 Capsella grandiflora
Cagra.2428s0005 2.0kb upstream 2.0kb upstream 2000 false Scaffold2428: 18488-20487 Capsella grandiflora
Cagra.2428s0005 2.0kb downstream 2.0kb downstream 3032 true Scaffold2428: 20488-23519 Capsella grandiflora
Cagra.2428s0005 2.0kb downstream 2.0kb downstream 2000 false Scaffold2428: 21520-23519 Capsella grandiflora
Cagra.2428s0005 5.0kb upstream 5.0kb upstream 6032 true Scaffold2428: 15488-21519 Capsella grandiflora
Cagra.2428s0005 5.0kb upstream 5.0kb upstream 5000 false Scaffold2428: 15488-20487 Capsella grandiflora
Cagra.2428s0005 5.0kb downstream 5.0kb downstream 6032 true Scaffold2428: 20488-26519 Capsella grandiflora
Cagra.2428s0005 5.0kb downstream 5.0kb downstream 5000 false Scaffold2428: 21520-26519 Capsella grandiflora
Cagra.2428s0005 10.0kb upstream 10.0kb upstream 11032 true Scaffold2428: 10488-21519 Capsella grandiflora
Cagra.2428s0005 10.0kb upstream 10.0kb upstream 10000 false Scaffold2428: 10488-20487 Capsella grandiflora
Cagra.2428s0005 10.0kb downstream 10.0kb downstream 11032 true Scaffold2428: 20488-31519 Capsella grandiflora
Cagra.2428s0005 10.0kb downstream 10.0kb downstream 10000 false Scaffold2428: 21520-31519 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374981 5261 Brassicaceae View MSA
123840602 5264 Brassicales-Malvales View MSA
124340230 5266 SBM View MSA
124254057 5268 Malvidae View MSA
124073880 5270 Rosid View MSA
123753521 5271 Pentapetalae View MSA
122797928 5272 Eudicot View MSA
122051434 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351748 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain