Gene : Cagra.0239s0069 C. grandiflora v1.1
Defline:  (1 of 3) PTHR31636:SF11 - SCARECROW-LIKE PROTEIN 22-RELATED Genomic Order:  69
Name:  ? Cagra.0239s0069 Secondary Identifier:  ? PAC:28915456
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0239s0069 0.5kb upstream 0.5kb upstream 2411 true Scaffold239: 245999-248409 Capsella grandiflora
Cagra.0239s0069 0.5kb upstream 0.5kb upstream 500 false Scaffold239: 247910-248409 Capsella grandiflora
Cagra.0239s0069 0.5kb downstream 0.5kb downstream 2411 true Scaffold239: 245499-247909 Capsella grandiflora
Cagra.0239s0069 0.5kb downstream 0.5kb downstream 500 false Scaffold239: 245499-245998 Capsella grandiflora
Cagra.0239s0069 1.0kb upstream 1.0kb upstream 2911 true Scaffold239: 245999-248909 Capsella grandiflora
Cagra.0239s0069 1.0kb upstream 1.0kb upstream 1000 false Scaffold239: 247910-248909 Capsella grandiflora
Cagra.0239s0069 1.0kb downstream 1.0kb downstream 2911 true Scaffold239: 244999-247909 Capsella grandiflora
Cagra.0239s0069 1.0kb downstream 1.0kb downstream 1000 false Scaffold239: 244999-245998 Capsella grandiflora
Cagra.0239s0069 2.0kb upstream 2.0kb upstream 3911 true Scaffold239: 245999-249909 Capsella grandiflora
Cagra.0239s0069 2.0kb upstream 2.0kb upstream 2000 false Scaffold239: 247910-249909 Capsella grandiflora
Cagra.0239s0069 2.0kb downstream 2.0kb downstream 3911 true Scaffold239: 243999-247909 Capsella grandiflora
Cagra.0239s0069 2.0kb downstream 2.0kb downstream 2000 false Scaffold239: 243999-245998 Capsella grandiflora
Cagra.0239s0069 5.0kb upstream 5.0kb upstream 6911 true Scaffold239: 245999-252909 Capsella grandiflora
Cagra.0239s0069 5.0kb upstream 5.0kb upstream 5000 false Scaffold239: 247910-252909 Capsella grandiflora
Cagra.0239s0069 5.0kb downstream 5.0kb downstream 6911 true Scaffold239: 240999-247909 Capsella grandiflora
Cagra.0239s0069 5.0kb downstream 5.0kb downstream 5000 false Scaffold239: 240999-245998 Capsella grandiflora
Cagra.0239s0069 10.0kb upstream 10.0kb upstream 11911 true Scaffold239: 245999-257909 Capsella grandiflora
Cagra.0239s0069 10.0kb upstream 10.0kb upstream 10000 false Scaffold239: 247910-257909 Capsella grandiflora
Cagra.0239s0069 10.0kb downstream 10.0kb downstream 11911 true Scaffold239: 235999-247909 Capsella grandiflora
Cagra.0239s0069 10.0kb downstream 10.0kb downstream 10000 false Scaffold239: 235999-245998 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360865 5261 Brassicaceae View MSA
123841679 5264 Brassicales-Malvales View MSA
124337623 5266 SBM View MSA
124250947 5268 Malvidae View MSA
124067297 5270 Rosid View MSA
123748991 5271 Pentapetalae View MSA
122793941 5272 Eudicot View MSA
122048418 5273 Angiosperm View MSA
121350524 5274 Embryophyte View MSA
123381771 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain