Gene : Cagra.2350s0095 C. grandiflora v1.1
Defline:  (1 of 1) PTHR11618//PTHR11618:SF23 - TRANSCRIPTION INITIATION FACTOR IIB-RELATED Genomic Order:  95
Name:  ? Cagra.2350s0095 Secondary Identifier:  ? PAC:28908729
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0 Pathways

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2350s0095 0.5kb upstream 0.5kb upstream 2189 true Scaffold2350: 363678-365866 Capsella grandiflora
Cagra.2350s0095 0.5kb upstream 0.5kb upstream 500 false Scaffold2350: 363678-364177 Capsella grandiflora
Cagra.2350s0095 0.5kb downstream 0.5kb downstream 2189 true Scaffold2350: 364178-366366 Capsella grandiflora
Cagra.2350s0095 0.5kb downstream 0.5kb downstream 500 false Scaffold2350: 365867-366366 Capsella grandiflora
Cagra.2350s0095 1.0kb upstream 1.0kb upstream 2689 true Scaffold2350: 363178-365866 Capsella grandiflora
Cagra.2350s0095 1.0kb upstream 1.0kb upstream 1000 false Scaffold2350: 363178-364177 Capsella grandiflora
Cagra.2350s0095 1.0kb downstream 1.0kb downstream 2689 true Scaffold2350: 364178-366866 Capsella grandiflora
Cagra.2350s0095 1.0kb downstream 1.0kb downstream 1000 false Scaffold2350: 365867-366866 Capsella grandiflora
Cagra.2350s0095 2.0kb upstream 2.0kb upstream 3689 true Scaffold2350: 362178-365866 Capsella grandiflora
Cagra.2350s0095 2.0kb upstream 2.0kb upstream 2000 false Scaffold2350: 362178-364177 Capsella grandiflora
Cagra.2350s0095 2.0kb downstream 2.0kb downstream 3689 true Scaffold2350: 364178-367866 Capsella grandiflora
Cagra.2350s0095 2.0kb downstream 2.0kb downstream 2000 false Scaffold2350: 365867-367866 Capsella grandiflora
Cagra.2350s0095 5.0kb upstream 5.0kb upstream 6689 true Scaffold2350: 359178-365866 Capsella grandiflora
Cagra.2350s0095 5.0kb upstream 5.0kb upstream 5000 false Scaffold2350: 359178-364177 Capsella grandiflora
Cagra.2350s0095 5.0kb downstream 5.0kb downstream 6689 true Scaffold2350: 364178-370866 Capsella grandiflora
Cagra.2350s0095 5.0kb downstream 5.0kb downstream 5000 false Scaffold2350: 365867-370866 Capsella grandiflora
Cagra.2350s0095 10.0kb upstream 10.0kb upstream 11689 true Scaffold2350: 354178-365866 Capsella grandiflora
Cagra.2350s0095 10.0kb upstream 10.0kb upstream 10000 false Scaffold2350: 354178-364177 Capsella grandiflora
Cagra.2350s0095 10.0kb downstream 10.0kb downstream 11689 true Scaffold2350: 364178-375866 Capsella grandiflora
Cagra.2350s0095 10.0kb downstream 10.0kb downstream 10000 false Scaffold2350: 365867-375866 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375882 5261 Brassicaceae View MSA
123832926 5264 Brassicales-Malvales View MSA
124340116 5266 SBM View MSA
124240973 5268 Malvidae View MSA
124067498 5270 Rosid View MSA
123742191 5271 Pentapetalae View MSA
122787938 5272 Eudicot View MSA
122042980 5273 Angiosperm View MSA
121346449 5274 Embryophyte View MSA
123427604 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain