Protein Family : transcription initiation factor IIB, putative, expressed 123427604

Method ID:  5275 Method Name:  Viridiplantae
Sequence Alignment:  View MSA Member Count:  166

166 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
444750 (1 of 2) PTHR11618:SF4 - TRANSCRIPTION FACTOR IIIB 90 KDA SUBUNIT S. moellendorffii v1.0 3065   scaffold_47: 525809-528873
410325 (1 of 2) PTHR11618:SF4 - TRANSCRIPTION FACTOR IIIB 90 KDA SUBUNIT S. moellendorffii v1.0 2852   scaffold_12: 1901747-1904598
30072.t000007 (1 of 1) PTHR11618:SF4 - TRANSCRIPTION FACTOR IIIB 90 KDA SUBUNIT R. communis v0.1 11231   30072: 54459-65689
30136.t000002 (1 of 2) K15196 - transcription factor IIIB 90 kDa subunit (BRF1, GTF3B) R. communis v0.1 1599   30136: 80930-82528
Cucsa.163720 (1 of 2) PTHR11618:SF4 - TRANSCRIPTION FACTOR IIIB 90 KDA SUBUNIT C. sativus v1.0 11096   scaffold01146: 147677-158772
Cucsa.213200 (1 of 1) PTHR11618//PTHR11618:SF23 - TRANSCRIPTION INITIATION FACTOR IIB-RELATED C. sativus v1.0 2117   scaffold01543: 974846-976962
orange1.1g008401m.g (1 of 1) PTHR11618:SF4 - TRANSCRIPTION FACTOR IIIB 90 KDA SUBUNIT C. sinensis v1.1 7262   scaffold00029: 844342-851603
orange1.1g047665m.g (1 of 1) PTHR11618//PTHR11618:SF23 - TRANSCRIPTION INITIATION FACTOR IIB-RELATED C. sinensis v1.1 1593   scaffold00087: 11914-13506
AT4G35540 (1 of 1) PTHR11618//PTHR11618:SF23 - TRANSCRIPTION INITIATION FACTOR IIB-RELATED // SUBFAMILY NOT NAMED A. thaliana TAIR10 1764   Chr4: 16873835-16875598
AT3G09360 (1 of 3) K15196 - transcription factor IIIB 90 kDa subunit (BRF1, GTF3B) A. thaliana TAIR10 5143   Chr3: 2873449-2878591
AT2G01280 (1 of 3) K15196 - transcription factor IIIB 90 kDa subunit (BRF1, GTF3B) A. thaliana TAIR10 MEE65 3719   Chr2: 145676-149394
Thhalv10027569m.g (1 of 1) PTHR11618//PTHR11618:SF23 - TRANSCRIPTION INITIATION FACTOR IIB-RELATED E. salsugineum v1.0 1572   scaffold_1: 1892747-1894318
Thhalv10027195m.g (1 of 3) PTHR11618:SF4 - TRANSCRIPTION FACTOR IIIB 90 KDA SUBUNIT E. salsugineum v1.0 2523   scaffold_1: 14522886-14525408
Thhalv10020503m.g (1 of 3) PTHR11618:SF4 - TRANSCRIPTION FACTOR IIIB 90 KDA SUBUNIT E. salsugineum v1.0 4611   scaffold_13: 6521289-6525899
Thhalv10011362m.g (1 of 3) PTHR11618:SF4 - TRANSCRIPTION FACTOR IIIB 90 KDA SUBUNIT E. salsugineum v1.0 3919   scaffold_7: 1668198-1672116
Ciclev10019321m.g (1 of 1) PTHR11618:SF4 - TRANSCRIPTION FACTOR IIIB 90 KDA SUBUNIT C. clementina v1.0 8872   scaffold_3: 41892791-41901662
Ciclev10031207m.g (1 of 1) PTHR11618//PTHR11618:SF23 - TRANSCRIPTION INITIATION FACTOR IIB-RELATED C. clementina v1.0 1980   scaffold_4: 14275848-14277827
Lus10014847.g (1 of 2) PTHR11618//PTHR11618:SF23 - TRANSCRIPTION INITIATION FACTOR IIB-RELATED L. usitatissimum v1.0 1596   scaffold184: 545608-547203
Lus10038957.g (1 of 1) PTHR11618:SF4 - TRANSCRIPTION FACTOR IIIB 90 KDA SUBUNIT L. usitatissimum v1.0 4127   scaffold34: 1010876-1015002
Gorai.013G196300 (1 of 2) PTHR11618:SF4 - TRANSCRIPTION FACTOR IIIB 90 KDA SUBUNIT G. raimondii v2.1 9460   Chr13: 49991653-50001112
Gorai.007G182800 (1 of 2) PTHR11618:SF4 - TRANSCRIPTION FACTOR IIIB 90 KDA SUBUNIT G. raimondii v2.1 9561   Chr07: 17432905-17442465
Gorai.007G174700 (1 of 1) PTHR11618//PTHR11618:SF23 - TRANSCRIPTION INITIATION FACTOR IIB-RELATED G. raimondii v2.1 1990   Chr07: 16173813-16175802
e_gw1.14.63.1 (1 of 1) PTHR11618:SF4 - TRANSCRIPTION FACTOR IIIB 90 KDA SUBUNIT C. subellipsoidea C-169 v2.0 3550   scaffold_14: 1443524-1447073
MicpuC2.estExt_fgenesh1_pg.C_90182 (1 of 1) PTHR11618:SF4 - TRANSCRIPTION FACTOR IIIB 90 KDA SUBUNIT M. pusilla CCMP1545 v3.0 3436   scaffold_9: 530991-534426
MicpuC2.fgenesh1_pg.C_scaffold_13000252 (1 of 3) PTHR11618 - TRANSCRIPTION INITIATION FACTOR IIB-RELATED M. pusilla CCMP1545 v3.0 2656   scaffold_13: 841772-844427
AZW_EuGene.1000010115 (1 of 3) PTHR11618 - TRANSCRIPTION INITIATION FACTOR IIB-RELATED M. sp RCC299 v3.0 2422   Chr_10: 260091-262512
e_gw2.06.138.1 (1 of 1) PTHR11618:SF4 - TRANSCRIPTION FACTOR IIIB 90 KDA SUBUNIT M. sp RCC299 v3.0 2607   Chr_06: 501944-504550
e_gwEuk.21.63.1 (1 of 2) PTHR11618:SF4 - TRANSCRIPTION FACTOR IIIB 90 KDA SUBUNIT O. lucimarinus v2.0 2277   Chr_21: 256270-258546
e_gwEuk.13.69.1 (1 of 2) PTHR11618:SF4 - TRANSCRIPTION FACTOR IIIB 90 KDA SUBUNIT O. lucimarinus v2.0 2277   Chr_13: 269923-272199
Thecc1EG001990 (1 of 1) PTHR11618//PTHR11618:SF23 - TRANSCRIPTION INITIATION FACTOR IIB-RELATED // SUBFAMILY NOT NAMED T. cacao v1.1 2415   scaffold_1: 10821036-10823450

166 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
444750 S. moellendorffii v1.0 123427604 transcription initiation factor IIB, putative, expressed 2 5275 Viridiplantae
410325 S. moellendorffii v1.0 123427604 transcription initiation factor IIB, putative, expressed 2 5275 Viridiplantae
30072.m000933 R. communis v0.1 123427604 transcription initiation factor IIB, putative, expressed 2 5275 Viridiplantae
30136.m001006 R. communis v0.1 123427604 transcription initiation factor IIB, putative, expressed 2 5275 Viridiplantae
Cucsa.163720.1 C. sativus v1.0 123427604 transcription initiation factor IIB, putative, expressed 2 5275 Viridiplantae
Cucsa.213200.1 C. sativus v1.0 123427604 transcription initiation factor IIB, putative, expressed 2 5275 Viridiplantae
orange1.1g008401m C. sinensis v1.1 123427604 transcription initiation factor IIB, putative, expressed 2 5275 Viridiplantae
orange1.1g047665m C. sinensis v1.1 123427604 transcription initiation factor IIB, putative, expressed 2 5275 Viridiplantae
AT4G35540.1 A. thaliana TAIR10 123427604 transcription initiation factor IIB, putative, expressed 3 5275 Viridiplantae
AT3G09360.1 A. thaliana TAIR10 123427604 transcription initiation factor IIB, putative, expressed 3 5275 Viridiplantae
AT2G01280.1 A. thaliana TAIR10 123427604 transcription initiation factor IIB, putative, expressed 3 5275 Viridiplantae
Thhalv10027569m E. salsugineum v1.0 123427604 transcription initiation factor IIB, putative, expressed 4 5275 Viridiplantae
Thhalv10027195m E. salsugineum v1.0 123427604 transcription initiation factor IIB, putative, expressed 4 5275 Viridiplantae
Thhalv10020503m E. salsugineum v1.0 123427604 transcription initiation factor IIB, putative, expressed 4 5275 Viridiplantae
Thhalv10011362m E. salsugineum v1.0 123427604 transcription initiation factor IIB, putative, expressed 4 5275 Viridiplantae
Ciclev10019321m C. clementina v1.0 123427604 transcription initiation factor IIB, putative, expressed 2 5275 Viridiplantae
Ciclev10031207m C. clementina v1.0 123427604 transcription initiation factor IIB, putative, expressed 2 5275 Viridiplantae
Lus10014847 L. usitatissimum v1.0 123427604 transcription initiation factor IIB, putative, expressed 2 5275 Viridiplantae
Lus10038957 L. usitatissimum v1.0 123427604 transcription initiation factor IIB, putative, expressed 2 5275 Viridiplantae
Gorai.013G196300.1 G. raimondii v2.1 123427604 transcription initiation factor IIB, putative, expressed 3 5275 Viridiplantae
Gorai.007G182800.1 G. raimondii v2.1 123427604 transcription initiation factor IIB, putative, expressed 3 5275 Viridiplantae
Gorai.007G174700.1 G. raimondii v2.1 123427604 transcription initiation factor IIB, putative, expressed 3 5275 Viridiplantae
18052 C. subellipsoidea C-169 v2.0 123427604 transcription initiation factor IIB, putative, expressed 1 5275 Viridiplantae
48092 M. pusilla CCMP1545 v3.0 123427604 transcription initiation factor IIB, putative, expressed 2 5275 Viridiplantae
42602 M. pusilla CCMP1545 v3.0 123427604 transcription initiation factor IIB, putative, expressed 2 5275 Viridiplantae
113353 M. sp RCC299 v3.0 123427604 transcription initiation factor IIB, putative, expressed 2 5275 Viridiplantae
82380 M. sp RCC299 v3.0 123427604 transcription initiation factor IIB, putative, expressed 2 5275 Viridiplantae
36784 O. lucimarinus v2.0 123427604 transcription initiation factor IIB, putative, expressed 2 5275 Viridiplantae
41529 O. lucimarinus v2.0 123427604 transcription initiation factor IIB, putative, expressed 2 5275 Viridiplantae
Thecc1EG001990t1 T. cacao v1.1 123427604 transcription initiation factor IIB, putative, expressed 2 5275 Viridiplantae