Gene : Thecc1EG001990 T. cacao v1.1
Defline:  (1 of 1) PTHR11618//PTHR11618:SF23 - TRANSCRIPTION INITIATION FACTOR IIB-RELATED // SUBFAMILY NOT NAMED Genomic Order:  1651
Name:  ? Thecc1EG001990 Secondary Identifier:  ? PAC:27437510
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG001990 0.5kb upstream 0.5kb upstream 2915 true scaffold_1: 10821036-10823950 Theobroma cacao
Thecc1EG001990 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 10823451-10823950 Theobroma cacao
Thecc1EG001990 0.5kb downstream 0.5kb downstream 2915 true scaffold_1: 10820536-10823450 Theobroma cacao
Thecc1EG001990 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 10820536-10821035 Theobroma cacao
Thecc1EG001990 1.0kb upstream 1.0kb upstream 3415 true scaffold_1: 10821036-10824450 Theobroma cacao
Thecc1EG001990 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 10823451-10824450 Theobroma cacao
Thecc1EG001990 1.0kb downstream 1.0kb downstream 3415 true scaffold_1: 10820036-10823450 Theobroma cacao
Thecc1EG001990 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 10820036-10821035 Theobroma cacao
Thecc1EG001990 2.0kb upstream 2.0kb upstream 4415 true scaffold_1: 10821036-10825450 Theobroma cacao
Thecc1EG001990 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 10823451-10825450 Theobroma cacao
Thecc1EG001990 2.0kb downstream 2.0kb downstream 4415 true scaffold_1: 10819036-10823450 Theobroma cacao
Thecc1EG001990 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 10819036-10821035 Theobroma cacao
Thecc1EG001990 5.0kb upstream 5.0kb upstream 7415 true scaffold_1: 10821036-10828450 Theobroma cacao
Thecc1EG001990 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 10823451-10828450 Theobroma cacao
Thecc1EG001990 5.0kb downstream 5.0kb downstream 7415 true scaffold_1: 10816036-10823450 Theobroma cacao
Thecc1EG001990 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 10816036-10821035 Theobroma cacao
Thecc1EG001990 10.0kb upstream 10.0kb upstream 12415 true scaffold_1: 10821036-10833450 Theobroma cacao
Thecc1EG001990 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 10823451-10833450 Theobroma cacao
Thecc1EG001990 10.0kb downstream 10.0kb downstream 12415 true scaffold_1: 10811036-10823450 Theobroma cacao
Thecc1EG001990 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 10811036-10821035 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123832926 5264 Brassicales-Malvales View MSA
124340116 5266 SBM View MSA
124240973 5268 Malvidae View MSA
124067498 5270 Rosid View MSA
123742191 5271 Pentapetalae View MSA
122787938 5272 Eudicot View MSA
122042980 5273 Angiosperm View MSA
121346449 5274 Embryophyte View MSA
123427604 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain