Gene : MEE65 A. thaliana TAIR10
Primary Identifier:  ? AT2G01280 Defline:  (1 of 3) K15196 - transcription factor IIIB 90 kDa subunit (BRF1, GTF3B)
Genomic Order:  27 Name:  ? AT2G01280
Secondary Identifier:  ? PAC:19639387
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G01280 0.5kb upstream 0.5kb upstream 4219 true Chr2: 145176-149394 Arabidopsis thaliana
AT2G01280 0.5kb upstream 0.5kb upstream 500 false Chr2: 145176-145675 Arabidopsis thaliana
AT2G01280 0.5kb downstream 0.5kb downstream 4219 true Chr2: 145676-149894 Arabidopsis thaliana
AT2G01280 0.5kb downstream 0.5kb downstream 500 false Chr2: 149395-149894 Arabidopsis thaliana
AT2G01280 1.0kb upstream 1.0kb upstream 4719 true Chr2: 144676-149394 Arabidopsis thaliana
AT2G01280 1.0kb upstream 1.0kb upstream 1000 false Chr2: 144676-145675 Arabidopsis thaliana
AT2G01280 1.0kb downstream 1.0kb downstream 4719 true Chr2: 145676-150394 Arabidopsis thaliana
AT2G01280 1.0kb downstream 1.0kb downstream 1000 false Chr2: 149395-150394 Arabidopsis thaliana
AT2G01280 2.0kb upstream 2.0kb upstream 5719 true Chr2: 143676-149394 Arabidopsis thaliana
AT2G01280 2.0kb upstream 2.0kb upstream 2000 false Chr2: 143676-145675 Arabidopsis thaliana
AT2G01280 2.0kb downstream 2.0kb downstream 5719 true Chr2: 145676-151394 Arabidopsis thaliana
AT2G01280 2.0kb downstream 2.0kb downstream 2000 false Chr2: 149395-151394 Arabidopsis thaliana
AT2G01280 5.0kb upstream 5.0kb upstream 8719 true Chr2: 140676-149394 Arabidopsis thaliana
AT2G01280 5.0kb upstream 5.0kb upstream 5000 false Chr2: 140676-145675 Arabidopsis thaliana
AT2G01280 5.0kb downstream 5.0kb downstream 8719 true Chr2: 145676-154394 Arabidopsis thaliana
AT2G01280 5.0kb downstream 5.0kb downstream 5000 false Chr2: 149395-154394 Arabidopsis thaliana
AT2G01280 10.0kb upstream 10.0kb upstream 13719 true Chr2: 135676-149394 Arabidopsis thaliana
AT2G01280 10.0kb upstream 10.0kb upstream 10000 false Chr2: 135676-145675 Arabidopsis thaliana
AT2G01280 10.0kb downstream 10.0kb downstream 13719 true Chr2: 145676-159394 Arabidopsis thaliana
AT2G01280 10.0kb downstream 10.0kb downstream 10000 false Chr2: 149395-159394 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377742 5261 Brassicaceae View MSA
123801620 5264 Brassicales-Malvales View MSA
124298899 5266 SBM View MSA
124150438 5268 Malvidae View MSA
123876048 5270 Rosid View MSA
123746124 5271 Pentapetalae View MSA
122796668 5272 Eudicot View MSA
122049145 5273 Angiosperm View MSA
121351360 5274 Embryophyte View MSA
123427604 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.092     Low  
cufflinks 0.049     Low  
cufflinks 0.08     Low  
cufflinks 0.013     Low Low
cufflinks 0.07     Low  
cufflinks 0.022     Low  

0 Strain