Gene : Cucsa.163720 C. sativus v1.0
Defline:  (1 of 2) PTHR11618:SF4 - TRANSCRIPTION FACTOR IIIB 90 KDA SUBUNIT Genomic Order:  19
Name:  ? Cucsa.163720 Secondary Identifier:  ? PAC:16965840
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.163720 0.5kb upstream 0.5kb upstream 11596 true scaffold01146: 147677-159272 Cucumis sativus
Cucsa.163720 0.5kb upstream 0.5kb upstream 500 false scaffold01146: 158773-159272 Cucumis sativus
Cucsa.163720 0.5kb downstream 0.5kb downstream 11596 true scaffold01146: 147177-158772 Cucumis sativus
Cucsa.163720 0.5kb downstream 0.5kb downstream 500 false scaffold01146: 147177-147676 Cucumis sativus
Cucsa.163720 1.0kb upstream 1.0kb upstream 12096 true scaffold01146: 147677-159772 Cucumis sativus
Cucsa.163720 1.0kb upstream 1.0kb upstream 1000 false scaffold01146: 158773-159772 Cucumis sativus
Cucsa.163720 1.0kb downstream 1.0kb downstream 12096 true scaffold01146: 146677-158772 Cucumis sativus
Cucsa.163720 1.0kb downstream 1.0kb downstream 1000 false scaffold01146: 146677-147676 Cucumis sativus
Cucsa.163720 2.0kb upstream 2.0kb upstream 13096 true scaffold01146: 147677-160772 Cucumis sativus
Cucsa.163720 2.0kb upstream 2.0kb upstream 2000 false scaffold01146: 158773-160772 Cucumis sativus
Cucsa.163720 2.0kb downstream 2.0kb downstream 13096 true scaffold01146: 145677-158772 Cucumis sativus
Cucsa.163720 2.0kb downstream 2.0kb downstream 2000 false scaffold01146: 145677-147676 Cucumis sativus
Cucsa.163720 5.0kb upstream 5.0kb upstream 16096 true scaffold01146: 147677-163772 Cucumis sativus
Cucsa.163720 5.0kb upstream 5.0kb upstream 5000 false scaffold01146: 158773-163772 Cucumis sativus
Cucsa.163720 5.0kb downstream 5.0kb downstream 16096 true scaffold01146: 142677-158772 Cucumis sativus
Cucsa.163720 5.0kb downstream 5.0kb downstream 5000 false scaffold01146: 142677-147676 Cucumis sativus
Cucsa.163720 10.0kb upstream 10.0kb upstream 21096 true scaffold01146: 147677-168772 Cucumis sativus
Cucsa.163720 10.0kb upstream 10.0kb upstream 10000 false scaffold01146: 158773-168772 Cucumis sativus
Cucsa.163720 10.0kb downstream 10.0kb downstream 21096 true scaffold01146: 137677-158772 Cucumis sativus
Cucsa.163720 10.0kb downstream 10.0kb downstream 10000 false scaffold01146: 137677-147676 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311198 5265 Fabidae View MSA
124069197 5270 Rosid View MSA
123746124 5271 Pentapetalae View MSA
122796668 5272 Eudicot View MSA
122049145 5273 Angiosperm View MSA
121351360 5274 Embryophyte View MSA
123427604 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain