Gene : Cagra.2564s0009 C. grandiflora v1.1
Defline:  (1 of 2) PTHR16201:SF34 - LYSOSOMAL AMINO ACID TRANSPORTER 1 Genomic Order:  9
Name:  ? Cagra.2564s0009 Secondary Identifier:  ? PAC:28894257
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2564s0009 0.5kb upstream 0.5kb upstream 1349 true Scaffold2564: 30841-32189 Capsella grandiflora
Cagra.2564s0009 0.5kb upstream 0.5kb upstream 500 false Scaffold2564: 30841-31340 Capsella grandiflora
Cagra.2564s0009 0.5kb downstream 0.5kb downstream 1349 true Scaffold2564: 31341-32689 Capsella grandiflora
Cagra.2564s0009 0.5kb downstream 0.5kb downstream 500 false Scaffold2564: 32190-32689 Capsella grandiflora
Cagra.2564s0009 1.0kb upstream 1.0kb upstream 1849 true Scaffold2564: 30341-32189 Capsella grandiflora
Cagra.2564s0009 1.0kb upstream 1.0kb upstream 1000 false Scaffold2564: 30341-31340 Capsella grandiflora
Cagra.2564s0009 1.0kb downstream 1.0kb downstream 1849 true Scaffold2564: 31341-33189 Capsella grandiflora
Cagra.2564s0009 1.0kb downstream 1.0kb downstream 1000 false Scaffold2564: 32190-33189 Capsella grandiflora
Cagra.2564s0009 2.0kb upstream 2.0kb upstream 2849 true Scaffold2564: 29341-32189 Capsella grandiflora
Cagra.2564s0009 2.0kb upstream 2.0kb upstream 2000 false Scaffold2564: 29341-31340 Capsella grandiflora
Cagra.2564s0009 2.0kb downstream 2.0kb downstream 2849 true Scaffold2564: 31341-34189 Capsella grandiflora
Cagra.2564s0009 2.0kb downstream 2.0kb downstream 2000 false Scaffold2564: 32190-34189 Capsella grandiflora
Cagra.2564s0009 5.0kb upstream 5.0kb upstream 5849 true Scaffold2564: 26341-32189 Capsella grandiflora
Cagra.2564s0009 5.0kb upstream 5.0kb upstream 5000 false Scaffold2564: 26341-31340 Capsella grandiflora
Cagra.2564s0009 5.0kb downstream 5.0kb downstream 5849 true Scaffold2564: 31341-37189 Capsella grandiflora
Cagra.2564s0009 5.0kb downstream 5.0kb downstream 5000 false Scaffold2564: 32190-37189 Capsella grandiflora
Cagra.2564s0009 10.0kb upstream 10.0kb upstream 10849 true Scaffold2564: 21341-32189 Capsella grandiflora
Cagra.2564s0009 10.0kb upstream 10.0kb upstream 10000 false Scaffold2564: 21341-31340 Capsella grandiflora
Cagra.2564s0009 10.0kb downstream 10.0kb downstream 10849 true Scaffold2564: 31341-42189 Capsella grandiflora
Cagra.2564s0009 10.0kb downstream 10.0kb downstream 10000 false Scaffold2564: 32190-42189 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122343346 5261 Brassicaceae View MSA
123783578 5264 Brassicales-Malvales View MSA
124281802 5266 SBM View MSA
124136498 5268 Malvidae View MSA
124069228 5270 Rosid View MSA
123744314 5271 Pentapetalae View MSA
122789645 5272 Eudicot View MSA
122043599 5273 Angiosperm View MSA
121344706 5274 Embryophyte View MSA
123427265 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain