Gene : Cagra.2495s0022 C. grandiflora v1.1
Defline:  (1 of 2) PF07014 - Hs1pro-1 protein C-terminus (Hs1pro-1_C) Genomic Order:  22
Name:  ? Cagra.2495s0022 Secondary Identifier:  ? PAC:28895885
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2495s0022 0.5kb upstream 0.5kb upstream 1978 true Scaffold2495: 90227-92204 Capsella grandiflora
Cagra.2495s0022 0.5kb upstream 0.5kb upstream 500 false Scaffold2495: 90227-90726 Capsella grandiflora
Cagra.2495s0022 0.5kb downstream 0.5kb downstream 1978 true Scaffold2495: 90727-92704 Capsella grandiflora
Cagra.2495s0022 0.5kb downstream 0.5kb downstream 500 false Scaffold2495: 92205-92704 Capsella grandiflora
Cagra.2495s0022 1.0kb upstream 1.0kb upstream 2478 true Scaffold2495: 89727-92204 Capsella grandiflora
Cagra.2495s0022 1.0kb upstream 1.0kb upstream 1000 false Scaffold2495: 89727-90726 Capsella grandiflora
Cagra.2495s0022 1.0kb downstream 1.0kb downstream 2478 true Scaffold2495: 90727-93204 Capsella grandiflora
Cagra.2495s0022 1.0kb downstream 1.0kb downstream 1000 false Scaffold2495: 92205-93204 Capsella grandiflora
Cagra.2495s0022 2.0kb upstream 2.0kb upstream 3478 true Scaffold2495: 88727-92204 Capsella grandiflora
Cagra.2495s0022 2.0kb upstream 2.0kb upstream 2000 false Scaffold2495: 88727-90726 Capsella grandiflora
Cagra.2495s0022 2.0kb downstream 2.0kb downstream 3478 true Scaffold2495: 90727-94204 Capsella grandiflora
Cagra.2495s0022 2.0kb downstream 2.0kb downstream 2000 false Scaffold2495: 92205-94204 Capsella grandiflora
Cagra.2495s0022 5.0kb upstream 5.0kb upstream 6478 true Scaffold2495: 85727-92204 Capsella grandiflora
Cagra.2495s0022 5.0kb upstream 5.0kb upstream 5000 false Scaffold2495: 85727-90726 Capsella grandiflora
Cagra.2495s0022 5.0kb downstream 5.0kb downstream 6478 true Scaffold2495: 90727-97204 Capsella grandiflora
Cagra.2495s0022 5.0kb downstream 5.0kb downstream 5000 false Scaffold2495: 92205-97204 Capsella grandiflora
Cagra.2495s0022 10.0kb upstream 10.0kb upstream 11478 true Scaffold2495: 80727-92204 Capsella grandiflora
Cagra.2495s0022 10.0kb upstream 10.0kb upstream 10000 false Scaffold2495: 80727-90726 Capsella grandiflora
Cagra.2495s0022 10.0kb downstream 10.0kb downstream 11478 true Scaffold2495: 90727-102204 Capsella grandiflora
Cagra.2495s0022 10.0kb downstream 10.0kb downstream 10000 false Scaffold2495: 92205-102204 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375095 5261 Brassicaceae View MSA
123840394 5264 Brassicales-Malvales View MSA
124345600 5266 SBM View MSA
124245094 5268 Malvidae View MSA
124067891 5270 Rosid View MSA
123747109 5271 Pentapetalae View MSA
122789570 5272 Eudicot View MSA
122043569 5273 Angiosperm View MSA
121344481 5274 Embryophyte View MSA
123380055 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain