Gene : Cagra.2515s0005 C. grandiflora v1.1
Defline:  (1 of 3) PF06127 - Protein of unknown function (DUF962) (DUF962) Genomic Order:  5
Name:  ? Cagra.2515s0005 Secondary Identifier:  ? PAC:28894436
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2515s0005 0.5kb upstream 0.5kb upstream 839 true Scaffold2515: 17028-17866 Capsella grandiflora
Cagra.2515s0005 0.5kb upstream 0.5kb upstream 500 false Scaffold2515: 17028-17527 Capsella grandiflora
Cagra.2515s0005 0.5kb downstream 0.5kb downstream 839 true Scaffold2515: 17528-18366 Capsella grandiflora
Cagra.2515s0005 0.5kb downstream 0.5kb downstream 500 false Scaffold2515: 17867-18366 Capsella grandiflora
Cagra.2515s0005 1.0kb upstream 1.0kb upstream 1339 true Scaffold2515: 16528-17866 Capsella grandiflora
Cagra.2515s0005 1.0kb upstream 1.0kb upstream 1000 false Scaffold2515: 16528-17527 Capsella grandiflora
Cagra.2515s0005 1.0kb downstream 1.0kb downstream 1339 true Scaffold2515: 17528-18866 Capsella grandiflora
Cagra.2515s0005 1.0kb downstream 1.0kb downstream 1000 false Scaffold2515: 17867-18866 Capsella grandiflora
Cagra.2515s0005 2.0kb upstream 2.0kb upstream 2339 true Scaffold2515: 15528-17866 Capsella grandiflora
Cagra.2515s0005 2.0kb upstream 2.0kb upstream 2000 false Scaffold2515: 15528-17527 Capsella grandiflora
Cagra.2515s0005 2.0kb downstream 2.0kb downstream 2339 true Scaffold2515: 17528-19866 Capsella grandiflora
Cagra.2515s0005 2.0kb downstream 2.0kb downstream 2000 false Scaffold2515: 17867-19866 Capsella grandiflora
Cagra.2515s0005 5.0kb upstream 5.0kb upstream 5339 true Scaffold2515: 12528-17866 Capsella grandiflora
Cagra.2515s0005 5.0kb upstream 5.0kb upstream 5000 false Scaffold2515: 12528-17527 Capsella grandiflora
Cagra.2515s0005 5.0kb downstream 5.0kb downstream 5339 true Scaffold2515: 17528-22866 Capsella grandiflora
Cagra.2515s0005 5.0kb downstream 5.0kb downstream 5000 false Scaffold2515: 17867-22866 Capsella grandiflora
Cagra.2515s0005 10.0kb upstream 10.0kb upstream 10339 true Scaffold2515: 7528-17866 Capsella grandiflora
Cagra.2515s0005 10.0kb upstream 10.0kb upstream 10000 false Scaffold2515: 7528-17527 Capsella grandiflora
Cagra.2515s0005 10.0kb downstream 10.0kb downstream 10339 true Scaffold2515: 17528-27866 Capsella grandiflora
Cagra.2515s0005 10.0kb downstream 10.0kb downstream 10000 false Scaffold2515: 17867-27866 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366973 5261 Brassicaceae View MSA
123836133 5264 Brassicales-Malvales View MSA
124337113 5266 SBM View MSA
124247411 5268 Malvidae View MSA
124061549 5270 Rosid View MSA
123745593 5271 Pentapetalae View MSA
122787415 5272 Eudicot View MSA
122044041 5273 Angiosperm View MSA
121350292 5274 Embryophyte View MSA
123424531 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain