Gene : Cagra.0027s0007 C. grandiflora v1.1
Defline:  (1 of 1) PTHR22952//PTHR22952:SF182 - CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED Genomic Order:  7
Name:  ? Cagra.0027s0007 Secondary Identifier:  ? PAC:28895758
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0027s0007 0.5kb upstream 0.5kb upstream 1550 true Scaffold27: 21392-22941 Capsella grandiflora
Cagra.0027s0007 0.5kb upstream 0.5kb upstream 500 false Scaffold27: 21392-21891 Capsella grandiflora
Cagra.0027s0007 0.5kb downstream 0.5kb downstream 1550 true Scaffold27: 21892-23441 Capsella grandiflora
Cagra.0027s0007 0.5kb downstream 0.5kb downstream 500 false Scaffold27: 22942-23441 Capsella grandiflora
Cagra.0027s0007 1.0kb upstream 1.0kb upstream 2050 true Scaffold27: 20892-22941 Capsella grandiflora
Cagra.0027s0007 1.0kb upstream 1.0kb upstream 1000 false Scaffold27: 20892-21891 Capsella grandiflora
Cagra.0027s0007 1.0kb downstream 1.0kb downstream 2050 true Scaffold27: 21892-23941 Capsella grandiflora
Cagra.0027s0007 1.0kb downstream 1.0kb downstream 1000 false Scaffold27: 22942-23941 Capsella grandiflora
Cagra.0027s0007 2.0kb upstream 2.0kb upstream 3050 true Scaffold27: 19892-22941 Capsella grandiflora
Cagra.0027s0007 2.0kb upstream 2.0kb upstream 2000 false Scaffold27: 19892-21891 Capsella grandiflora
Cagra.0027s0007 2.0kb downstream 2.0kb downstream 3050 true Scaffold27: 21892-24941 Capsella grandiflora
Cagra.0027s0007 2.0kb downstream 2.0kb downstream 2000 false Scaffold27: 22942-24941 Capsella grandiflora
Cagra.0027s0007 5.0kb upstream 5.0kb upstream 6050 true Scaffold27: 16892-22941 Capsella grandiflora
Cagra.0027s0007 5.0kb upstream 5.0kb upstream 5000 false Scaffold27: 16892-21891 Capsella grandiflora
Cagra.0027s0007 5.0kb downstream 5.0kb downstream 6050 true Scaffold27: 21892-27941 Capsella grandiflora
Cagra.0027s0007 5.0kb downstream 5.0kb downstream 5000 false Scaffold27: 22942-27941 Capsella grandiflora
Cagra.0027s0007 10.0kb upstream 10.0kb upstream 11050 true Scaffold27: 11892-22941 Capsella grandiflora
Cagra.0027s0007 10.0kb upstream 10.0kb upstream 10000 false Scaffold27: 11892-21891 Capsella grandiflora
Cagra.0027s0007 10.0kb downstream 10.0kb downstream 11050 true Scaffold27: 21892-32941 Capsella grandiflora
Cagra.0027s0007 10.0kb downstream 10.0kb downstream 10000 false Scaffold27: 22942-32941 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370842 5261 Brassicaceae View MSA
123840095 5264 Brassicales-Malvales View MSA
124322679 5266 SBM View MSA
124248527 5268 Malvidae View MSA
124069594 5270 Rosid View MSA
123751386 5271 Pentapetalae View MSA
122786761 5272 Eudicot View MSA
122045115 5273 Angiosperm View MSA
123428996 5275 Viridiplantae View MSA
121349851 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain