Gene : Cagra.2935s0004 C. grandiflora v1.1
Defline:  (1 of 168) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Genomic Order:  4
Name:  ? Cagra.2935s0004 Secondary Identifier:  ? PAC:28907240
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2935s0004 0.5kb upstream 0.5kb upstream 2613 true Scaffold2935: 16084-18696 Capsella grandiflora
Cagra.2935s0004 0.5kb upstream 0.5kb upstream 500 false Scaffold2935: 16084-16583 Capsella grandiflora
Cagra.2935s0004 0.5kb downstream 0.5kb downstream 2613 true Scaffold2935: 16584-19196 Capsella grandiflora
Cagra.2935s0004 0.5kb downstream 0.5kb downstream 500 false Scaffold2935: 18697-19196 Capsella grandiflora
Cagra.2935s0004 1.0kb upstream 1.0kb upstream 3113 true Scaffold2935: 15584-18696 Capsella grandiflora
Cagra.2935s0004 1.0kb upstream 1.0kb upstream 1000 false Scaffold2935: 15584-16583 Capsella grandiflora
Cagra.2935s0004 1.0kb downstream 1.0kb downstream 3113 true Scaffold2935: 16584-19696 Capsella grandiflora
Cagra.2935s0004 1.0kb downstream 1.0kb downstream 1000 false Scaffold2935: 18697-19696 Capsella grandiflora
Cagra.2935s0004 2.0kb upstream 2.0kb upstream 4113 true Scaffold2935: 14584-18696 Capsella grandiflora
Cagra.2935s0004 2.0kb upstream 2.0kb upstream 2000 false Scaffold2935: 14584-16583 Capsella grandiflora
Cagra.2935s0004 2.0kb downstream 2.0kb downstream 4113 true Scaffold2935: 16584-20696 Capsella grandiflora
Cagra.2935s0004 2.0kb downstream 2.0kb downstream 2000 false Scaffold2935: 18697-20696 Capsella grandiflora
Cagra.2935s0004 5.0kb upstream 5.0kb upstream 7113 true Scaffold2935: 11584-18696 Capsella grandiflora
Cagra.2935s0004 5.0kb upstream 5.0kb upstream 5000 false Scaffold2935: 11584-16583 Capsella grandiflora
Cagra.2935s0004 5.0kb downstream 5.0kb downstream 7113 true Scaffold2935: 16584-23696 Capsella grandiflora
Cagra.2935s0004 5.0kb downstream 5.0kb downstream 5000 false Scaffold2935: 18697-23696 Capsella grandiflora
Cagra.2935s0004 10.0kb upstream 10.0kb upstream 12113 true Scaffold2935: 6584-18696 Capsella grandiflora
Cagra.2935s0004 10.0kb upstream 10.0kb upstream 10000 false Scaffold2935: 6584-16583 Capsella grandiflora
Cagra.2935s0004 10.0kb downstream 10.0kb downstream 12113 true Scaffold2935: 16584-28696 Capsella grandiflora
Cagra.2935s0004 10.0kb downstream 10.0kb downstream 10000 false Scaffold2935: 18697-28696 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364817 5261 Brassicaceae View MSA
123829805 5264 Brassicales-Malvales View MSA
124350010 5266 SBM View MSA
124239834 5268 Malvidae View MSA
124065193 5270 Rosid View MSA
123739429 5271 Pentapetalae View MSA
122786943 5272 Eudicot View MSA
122051669 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351733 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain