Gene : Cagra.3025s0005 C. grandiflora v1.1
Defline:  (1 of 7) PF07816 - Protein of unknown function (DUF1645) (DUF1645) Genomic Order:  5
Name:  ? Cagra.3025s0005 Secondary Identifier:  ? PAC:28894513
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.3025s0005 0.5kb upstream 0.5kb upstream 1654 true Scaffold3025: 18692-20345 Capsella grandiflora
Cagra.3025s0005 0.5kb upstream 0.5kb upstream 500 false Scaffold3025: 18692-19191 Capsella grandiflora
Cagra.3025s0005 0.5kb downstream 0.5kb downstream 1654 true Scaffold3025: 19192-20845 Capsella grandiflora
Cagra.3025s0005 0.5kb downstream 0.5kb downstream 500 false Scaffold3025: 20346-20845 Capsella grandiflora
Cagra.3025s0005 1.0kb upstream 1.0kb upstream 2154 true Scaffold3025: 18192-20345 Capsella grandiflora
Cagra.3025s0005 1.0kb upstream 1.0kb upstream 1000 false Scaffold3025: 18192-19191 Capsella grandiflora
Cagra.3025s0005 1.0kb downstream 1.0kb downstream 2154 true Scaffold3025: 19192-21345 Capsella grandiflora
Cagra.3025s0005 1.0kb downstream 1.0kb downstream 1000 false Scaffold3025: 20346-21345 Capsella grandiflora
Cagra.3025s0005 2.0kb upstream 2.0kb upstream 3154 true Scaffold3025: 17192-20345 Capsella grandiflora
Cagra.3025s0005 2.0kb upstream 2.0kb upstream 2000 false Scaffold3025: 17192-19191 Capsella grandiflora
Cagra.3025s0005 2.0kb downstream 2.0kb downstream 3154 true Scaffold3025: 19192-22345 Capsella grandiflora
Cagra.3025s0005 2.0kb downstream 2.0kb downstream 2000 false Scaffold3025: 20346-22345 Capsella grandiflora
Cagra.3025s0005 5.0kb upstream 5.0kb upstream 6154 true Scaffold3025: 14192-20345 Capsella grandiflora
Cagra.3025s0005 5.0kb upstream 5.0kb upstream 5000 false Scaffold3025: 14192-19191 Capsella grandiflora
Cagra.3025s0005 5.0kb downstream 5.0kb downstream 6154 true Scaffold3025: 19192-25345 Capsella grandiflora
Cagra.3025s0005 5.0kb downstream 5.0kb downstream 5000 false Scaffold3025: 20346-25345 Capsella grandiflora
Cagra.3025s0005 10.0kb upstream 10.0kb upstream 11154 true Scaffold3025: 9192-20345 Capsella grandiflora
Cagra.3025s0005 10.0kb upstream 10.0kb upstream 10000 false Scaffold3025: 9192-19191 Capsella grandiflora
Cagra.3025s0005 10.0kb downstream 10.0kb downstream 11154 true Scaffold3025: 19192-30345 Capsella grandiflora
Cagra.3025s0005 10.0kb downstream 10.0kb downstream 10000 false Scaffold3025: 20346-30345 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375502 5261 Brassicaceae View MSA
123835192 5264 Brassicales-Malvales View MSA
124337537 5266 SBM View MSA
124249741 5268 Malvidae View MSA
124067177 5270 Rosid View MSA
123751144 5271 Pentapetalae View MSA
122791968 5272 Eudicot View MSA
122047451 5273 Angiosperm View MSA
121350053 5274 Embryophyte View MSA
123381556 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain