Gene : Cagra.3055s0008 C. grandiflora v1.1
Defline:  (1 of 64) PTHR32410:SF152 - C1 DOMAIN-CONTAINING PROTEIN-RELATED Genomic Order:  8
Name:  ? Cagra.3055s0008 Secondary Identifier:  ? PAC:28896872
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.3055s0008 0.5kb upstream 0.5kb upstream 2468 true Scaffold3055: 24812-27279 Capsella grandiflora
Cagra.3055s0008 0.5kb upstream 0.5kb upstream 500 false Scaffold3055: 26780-27279 Capsella grandiflora
Cagra.3055s0008 0.5kb downstream 0.5kb downstream 2468 true Scaffold3055: 24312-26779 Capsella grandiflora
Cagra.3055s0008 0.5kb downstream 0.5kb downstream 500 false Scaffold3055: 24312-24811 Capsella grandiflora
Cagra.3055s0008 1.0kb upstream 1.0kb upstream 2968 true Scaffold3055: 24812-27779 Capsella grandiflora
Cagra.3055s0008 1.0kb upstream 1.0kb upstream 1000 false Scaffold3055: 26780-27779 Capsella grandiflora
Cagra.3055s0008 1.0kb downstream 1.0kb downstream 2968 true Scaffold3055: 23812-26779 Capsella grandiflora
Cagra.3055s0008 1.0kb downstream 1.0kb downstream 1000 false Scaffold3055: 23812-24811 Capsella grandiflora
Cagra.3055s0008 2.0kb upstream 2.0kb upstream 3968 true Scaffold3055: 24812-28779 Capsella grandiflora
Cagra.3055s0008 2.0kb upstream 2.0kb upstream 2000 false Scaffold3055: 26780-28779 Capsella grandiflora
Cagra.3055s0008 2.0kb downstream 2.0kb downstream 3968 true Scaffold3055: 22812-26779 Capsella grandiflora
Cagra.3055s0008 2.0kb downstream 2.0kb downstream 2000 false Scaffold3055: 22812-24811 Capsella grandiflora
Cagra.3055s0008 5.0kb upstream 5.0kb upstream 6968 true Scaffold3055: 24812-31779 Capsella grandiflora
Cagra.3055s0008 5.0kb upstream 5.0kb upstream 5000 false Scaffold3055: 26780-31779 Capsella grandiflora
Cagra.3055s0008 5.0kb downstream 5.0kb downstream 6968 true Scaffold3055: 19812-26779 Capsella grandiflora
Cagra.3055s0008 5.0kb downstream 5.0kb downstream 5000 false Scaffold3055: 19812-24811 Capsella grandiflora
Cagra.3055s0008 10.0kb upstream 10.0kb upstream 11968 true Scaffold3055: 24812-36779 Capsella grandiflora
Cagra.3055s0008 10.0kb upstream 10.0kb upstream 10000 false Scaffold3055: 26780-36779 Capsella grandiflora
Cagra.3055s0008 10.0kb downstream 10.0kb downstream 11968 true Scaffold3055: 14812-26779 Capsella grandiflora
Cagra.3055s0008 10.0kb downstream 10.0kb downstream 10000 false Scaffold3055: 14812-24811 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378889 5261 Brassicaceae View MSA
123841170 5264 Brassicales-Malvales View MSA
124322862 5266 SBM View MSA
124254358 5268 Malvidae View MSA
124070692 5270 Rosid View MSA
123751823 5271 Pentapetalae View MSA
122797568 5272 Eudicot View MSA
122051127 5273 Angiosperm View MSA
121351229 5274 Embryophyte View MSA
123382066 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain