Gene : Cagra.0007s0063 C. grandiflora v1.1
Defline:  (1 of 168) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Genomic Order:  63
Name:  ? Cagra.0007s0063 Secondary Identifier:  ? PAC:28903199
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0007s0063 0.5kb upstream 0.5kb upstream 2090 true Scaffold7: 220271-222360 Capsella grandiflora
Cagra.0007s0063 0.5kb upstream 0.5kb upstream 500 false Scaffold7: 221861-222360 Capsella grandiflora
Cagra.0007s0063 0.5kb downstream 0.5kb downstream 2090 true Scaffold7: 219771-221860 Capsella grandiflora
Cagra.0007s0063 0.5kb downstream 0.5kb downstream 500 false Scaffold7: 219771-220270 Capsella grandiflora
Cagra.0007s0063 1.0kb upstream 1.0kb upstream 2590 true Scaffold7: 220271-222860 Capsella grandiflora
Cagra.0007s0063 1.0kb upstream 1.0kb upstream 1000 false Scaffold7: 221861-222860 Capsella grandiflora
Cagra.0007s0063 1.0kb downstream 1.0kb downstream 2590 true Scaffold7: 219271-221860 Capsella grandiflora
Cagra.0007s0063 1.0kb downstream 1.0kb downstream 1000 false Scaffold7: 219271-220270 Capsella grandiflora
Cagra.0007s0063 2.0kb upstream 2.0kb upstream 3590 true Scaffold7: 220271-223860 Capsella grandiflora
Cagra.0007s0063 2.0kb upstream 2.0kb upstream 2000 false Scaffold7: 221861-223860 Capsella grandiflora
Cagra.0007s0063 2.0kb downstream 2.0kb downstream 3590 true Scaffold7: 218271-221860 Capsella grandiflora
Cagra.0007s0063 2.0kb downstream 2.0kb downstream 2000 false Scaffold7: 218271-220270 Capsella grandiflora
Cagra.0007s0063 5.0kb upstream 5.0kb upstream 6590 true Scaffold7: 220271-226860 Capsella grandiflora
Cagra.0007s0063 5.0kb upstream 5.0kb upstream 5000 false Scaffold7: 221861-226860 Capsella grandiflora
Cagra.0007s0063 5.0kb downstream 5.0kb downstream 6590 true Scaffold7: 215271-221860 Capsella grandiflora
Cagra.0007s0063 5.0kb downstream 5.0kb downstream 5000 false Scaffold7: 215271-220270 Capsella grandiflora
Cagra.0007s0063 10.0kb upstream 10.0kb upstream 11590 true Scaffold7: 220271-231860 Capsella grandiflora
Cagra.0007s0063 10.0kb upstream 10.0kb upstream 10000 false Scaffold7: 221861-231860 Capsella grandiflora
Cagra.0007s0063 10.0kb downstream 10.0kb downstream 11590 true Scaffold7: 210271-221860 Capsella grandiflora
Cagra.0007s0063 10.0kb downstream 10.0kb downstream 10000 false Scaffold7: 210271-220270 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366146 5261 Brassicaceae View MSA
123831176 5264 Brassicales-Malvales View MSA
124341114 5266 SBM View MSA
124242787 5268 Malvidae View MSA
124050205 5270 Rosid View MSA
123753756 5271 Pentapetalae View MSA
122797794 5272 Eudicot View MSA
122051419 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351195 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain