Gene : Cagra.0007s0074 C. grandiflora v1.1
Defline:  (1 of 14) PTHR23081 - RNA POLYMERASE II CTD PHOSPHATASE Genomic Order:  74
Name:  ? Cagra.0007s0074 Secondary Identifier:  ? PAC:28903140
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Ontology Annotation Displayer

0 Pathways

Genomics

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Gene Structure Displayer

Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0007s0074 0.5kb upstream 0.5kb upstream 1346 true Scaffold7: 259744-261089 Capsella grandiflora
Cagra.0007s0074 0.5kb upstream 0.5kb upstream 500 false Scaffold7: 259744-260243 Capsella grandiflora
Cagra.0007s0074 0.5kb downstream 0.5kb downstream 1346 true Scaffold7: 260244-261589 Capsella grandiflora
Cagra.0007s0074 0.5kb downstream 0.5kb downstream 500 false Scaffold7: 261090-261589 Capsella grandiflora
Cagra.0007s0074 1.0kb upstream 1.0kb upstream 1846 true Scaffold7: 259244-261089 Capsella grandiflora
Cagra.0007s0074 1.0kb upstream 1.0kb upstream 1000 false Scaffold7: 259244-260243 Capsella grandiflora
Cagra.0007s0074 1.0kb downstream 1.0kb downstream 1846 true Scaffold7: 260244-262089 Capsella grandiflora
Cagra.0007s0074 1.0kb downstream 1.0kb downstream 1000 false Scaffold7: 261090-262089 Capsella grandiflora
Cagra.0007s0074 2.0kb upstream 2.0kb upstream 2846 true Scaffold7: 258244-261089 Capsella grandiflora
Cagra.0007s0074 2.0kb upstream 2.0kb upstream 2000 false Scaffold7: 258244-260243 Capsella grandiflora
Cagra.0007s0074 2.0kb downstream 2.0kb downstream 2846 true Scaffold7: 260244-263089 Capsella grandiflora
Cagra.0007s0074 2.0kb downstream 2.0kb downstream 2000 false Scaffold7: 261090-263089 Capsella grandiflora
Cagra.0007s0074 5.0kb upstream 5.0kb upstream 5846 true Scaffold7: 255244-261089 Capsella grandiflora
Cagra.0007s0074 5.0kb upstream 5.0kb upstream 5000 false Scaffold7: 255244-260243 Capsella grandiflora
Cagra.0007s0074 5.0kb downstream 5.0kb downstream 5846 true Scaffold7: 260244-266089 Capsella grandiflora
Cagra.0007s0074 5.0kb downstream 5.0kb downstream 5000 false Scaffold7: 261090-266089 Capsella grandiflora
Cagra.0007s0074 10.0kb upstream 10.0kb upstream 10846 true Scaffold7: 250244-261089 Capsella grandiflora
Cagra.0007s0074 10.0kb upstream 10.0kb upstream 10000 false Scaffold7: 250244-260243 Capsella grandiflora
Cagra.0007s0074 10.0kb downstream 10.0kb downstream 10846 true Scaffold7: 260244-271089 Capsella grandiflora
Cagra.0007s0074 10.0kb downstream 10.0kb downstream 10000 false Scaffold7: 261090-271089 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361478 5261 Brassicaceae View MSA
123798182 5264 Brassicales-Malvales View MSA
124295853 5266 SBM View MSA
124148177 5268 Malvidae View MSA
123874227 5270 Rosid View MSA
123458231 5271 Pentapetalae View MSA
122796658 5272 Eudicot View MSA
122050770 5273 Angiosperm View MSA
123428917 5275 Viridiplantae View MSA
121350466 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain