Protein Family : NLI interacting factor-like phosphatase, putative, expressed 123428917

Method ID:  5275 Method Name:  Viridiplantae
Sequence Alignment:  View MSA Member Count:  197

197 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
30147.t000335 (1 of 4) K18999 - RNA polymerase II C-terminal domain phosphatase-like 3/4 [EC:3.1.3.16] (CPL3_4) R. communis v0.1 486   30147: 4308080-4308565
30147.t000337 (1 of 1) PF00533//PF03031 - BRCA1 C Terminus (BRCT) domain (BRCT) // NLI interacting factor-like phosphatase (NIF) R. communis v0.1 1218   30147: 4309931-4311148
30179.t000004 (1 of 4) K18999 - RNA polymerase II C-terminal domain phosphatase-like 3/4 [EC:3.1.3.16] (CPL3_4) R. communis v0.1 3858   30179: 31604-35461
Cucsa.237020 (1 of 4) PTHR23081 - RNA POLYMERASE II CTD PHOSPHATASE C. sativus v1.0 8808   scaffold02023: 80323-89130
orange1.1g036523m.g (1 of 12) PTHR23081 - RNA POLYMERASE II CTD PHOSPHATASE C. sinensis v1.1 1164   scaffold00051: 107054-108217
AT5G23470 (1 of 14) PTHR23081 - RNA POLYMERASE II CTD PHOSPHATASE A. thaliana TAIR10 909   Chr5: 7913861-7914769
AT5G54210 (1 of 14) PTHR23081 - RNA POLYMERASE II CTD PHOSPHATASE A. thaliana TAIR10 921   Chr5: 22008612-22009532
AT5G58003 (1 of 3) K18999 - RNA polymerase II C-terminal domain phosphatase-like 3/4 [EC:3.1.3.16] (CPL3_4) A. thaliana TAIR10 CPL4 2245   Chr5: 23479804-23482048
AT3G17550 (1 of 14) PTHR23081 - RNA POLYMERASE II CTD PHOSPHATASE A. thaliana TAIR10 891   Chr3: 6005114-6006004
AT3G19595 (1 of 14) PTHR23081 - RNA POLYMERASE II CTD PHOSPHATASE A. thaliana TAIR10 924   Chr3: 6808585-6809508
AT2G04930 (1 of 14) PTHR23081 - RNA POLYMERASE II CTD PHOSPHATASE A. thaliana TAIR10 834   Chr2: 1733638-1734471
AT2G02290 (1 of 14) PTHR23081 - RNA POLYMERASE II CTD PHOSPHATASE A. thaliana TAIR10 909   Chr2: 604453-605361
Thhalv10021915m.g (1 of 15) PTHR23081 - RNA POLYMERASE II CTD PHOSPHATASE E. salsugineum v1.0 918   scaffold_13: 2415644-2416561
Thhalv10022155m.g (1 of 15) PTHR23081 - RNA POLYMERASE II CTD PHOSPHATASE E. salsugineum v1.0 888   scaffold_13: 2423833-2424720
Thhalv10022381m.g (1 of 15) PTHR23081 - RNA POLYMERASE II CTD PHOSPHATASE E. salsugineum v1.0 870   scaffold_13: 4228262-4229131
Thhalv10000277m.g (1 of 9) KOG1605 - TFIIF-interacting CTD phosphatase, including NLI-interacting factor (involved in RNA polymerase II regulation) E. salsugineum v1.0 978   scaffold_15: 7520962-7521939
Thhalv10013455m.g (1 of 2) PF00533//PF03031 - BRCA1 C Terminus (BRCT) domain (BRCT) // NLI interacting factor-like phosphatase (NIF) E. salsugineum v1.0 2411   scaffold_2: 9017700-9020110
Thhalv10014191m.g (1 of 15) PTHR23081 - RNA POLYMERASE II CTD PHOSPHATASE E. salsugineum v1.0 924   scaffold_2: 11166454-11167377
Thhalv10015557m.g (1 of 15) PTHR23081 - RNA POLYMERASE II CTD PHOSPHATASE E. salsugineum v1.0 996   scaffold_2: 11173155-11174150
Thhalv10022510m.g (1 of 15) PTHR23081 - RNA POLYMERASE II CTD PHOSPHATASE E. salsugineum v1.0 924   scaffold_292: 5539-6462
Thhalv10019698m.g (1 of 15) PTHR23081 - RNA POLYMERASE II CTD PHOSPHATASE E. salsugineum v1.0 993   scaffold_9: 1042991-1043983
Ciclev10010494m.g (1 of 5) PTHR23081 - RNA POLYMERASE II CTD PHOSPHATASE C. clementina v1.0 1164   scaffold_1: 2148031-2149194
Lus10021854.g (1 of 8) PTHR23081 - RNA POLYMERASE II CTD PHOSPHATASE L. usitatissimum v1.0 1932   scaffold164: 332746-334677
Lus10036277.g (1 of 5) KOG0323 - TFIIF-interacting CTD phosphatases, including NLI-interacting factor L. usitatissimum v1.0 3082   scaffold27: 763432-766513
Lus10036689.g (1 of 5) KOG0323 - TFIIF-interacting CTD phosphatases, including NLI-interacting factor L. usitatissimum v1.0 2835   scaffold31: 89985-92819
Lus10037233.g (1 of 1) PF03031//PF12738 - NLI interacting factor-like phosphatase (NIF) // twin BRCT domain (PTCB-BRCT) L. usitatissimum v1.0 2889   scaffold462: 913097-915985
Gorai.005G016300 (1 of 1) PF03031//PF12738 - NLI interacting factor-like phosphatase (NIF) // twin BRCT domain (PTCB-BRCT) G. raimondii v2.1 6067   Chr05: 1195206-1201272
fgenesh1_pg_5_num_223 (1 of 2) PTHR23081 - RNA POLYMERASE II CTD PHOSPHATASE C. subellipsoidea C-169 v2.0 2931   scaffold_5: 1541344-1544274
MicpuC2.EuGene.0000040309 (1 of 2) PTHR23081 - RNA POLYMERASE II CTD PHOSPHATASE M. pusilla CCMP1545 v3.0 2158   scaffold_4: 643595-645752
e_gw2.08.411.1 (1 of 1) PF03031//PF12738 - NLI interacting factor-like phosphatase (NIF) // twin BRCT domain (PTCB-BRCT) M. sp RCC299 v3.0 1059   Chr_08: 468906-469964

197 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
30179.m000555 R. communis v0.1 123428917 NLI interacting factor-like phosphatase, putative, expressed 3 5275 Viridiplantae
Cucsa.237020.1 C. sativus v1.0 123428917 NLI interacting factor-like phosphatase, putative, expressed 1 5275 Viridiplantae
AT5G58003.1 A. thaliana TAIR10 123428917 NLI interacting factor-like phosphatase, putative, expressed 7 5275 Viridiplantae
AT5G23470.1 A. thaliana TAIR10 123428917 NLI interacting factor-like phosphatase, putative, expressed 7 5275 Viridiplantae
Lus10021854 L. usitatissimum v1.0 123428917 NLI interacting factor-like phosphatase, putative, expressed 4 5275 Viridiplantae
Lus10036689 L. usitatissimum v1.0 123428917 NLI interacting factor-like phosphatase, putative, expressed 4 5275 Viridiplantae
Gorai.005G016300.1 G. raimondii v2.1 123428917 NLI interacting factor-like phosphatase, putative, expressed 1 5275 Viridiplantae
41020 C. subellipsoidea C-169 v2.0 123428917 NLI interacting factor-like phosphatase, putative, expressed 1 5275 Viridiplantae
84577 M. sp RCC299 v3.0 123428917 NLI interacting factor-like phosphatase, putative, expressed 2 5275 Viridiplantae
101698 M. sp RCC299 v3.0 123428917 NLI interacting factor-like phosphatase, putative, expressed 2 5275 Viridiplantae
6261 O. lucimarinus v2.0 123428917 NLI interacting factor-like phosphatase, putative, expressed 2 5275 Viridiplantae
Araha.4968s0003.1.p A. halleri v1.1 123428917 NLI interacting factor-like phosphatase, putative, expressed 5 5275 Viridiplantae
Araha.7189s0002.1.p A. halleri v1.1 123428917 NLI interacting factor-like phosphatase, putative, expressed 5 5275 Viridiplantae
Cagra.6943s0029.1.p C. grandiflora v1.1 123428917 NLI interacting factor-like phosphatase, putative, expressed 4 5275 Viridiplantae
Cagra.2848s0084.1.p C. grandiflora v1.1 123428917 NLI interacting factor-like phosphatase, putative, expressed 4 5275 Viridiplantae
Migut.F01588.1.p M. guttatus v2.0 123428917 NLI interacting factor-like phosphatase, putative, expressed 3 5275 Viridiplantae
Migut.B00998.1.p M. guttatus v2.0 123428917 NLI interacting factor-like phosphatase, putative, expressed 3 5275 Viridiplantae
Migut.M00493.1.p M. guttatus v2.0 123428917 NLI interacting factor-like phosphatase, putative, expressed 3 5275 Viridiplantae
Glyma.02G203000.1.p G. max Wm82.a2.v1 123428917 NLI interacting factor-like phosphatase, putative, expressed 2 5275 Viridiplantae
Brara.J01199.1.p B. rapa FPsc v1.3 123428917 NLI interacting factor-like phosphatase, putative, expressed 7 5275 Viridiplantae
Brara.C03745.1.p B. rapa FPsc v1.3 123428917 NLI interacting factor-like phosphatase, putative, expressed 7 5275 Viridiplantae
Brara.A02868.1.p B. rapa FPsc v1.3 123428917 NLI interacting factor-like phosphatase, putative, expressed 7 5275 Viridiplantae
Cre02.g102950.t1.1 C. reinhardtii v5.6 123428917 NLI interacting factor-like phosphatase, putative, expressed 1 5275 Viridiplantae
evm_27.model.AmTr_v1.0_scaffold00106.4 A. trichopoda v1.0 123428917 NLI interacting factor-like phosphatase, putative, expressed 4 5275 Viridiplantae
evm_27.model.AmTr_v1.0_scaffold00031.102 A. trichopoda v1.0 123428917 NLI interacting factor-like phosphatase, putative, expressed 4 5275 Viridiplantae
evm_27.model.AmTr_v1.0_scaffold00065.174 A. trichopoda v1.0 123428917 NLI interacting factor-like phosphatase, putative, expressed 4 5275 Viridiplantae
evm_27.model.AmTr_v1.0_scaffold00008.183 A. trichopoda v1.0 123428917 NLI interacting factor-like phosphatase, putative, expressed 4 5275 Viridiplantae
Traes_2AL_CDA5C4E63.3 T. aestivum v2.2 123428917 NLI interacting factor-like phosphatase, putative, expressed 5 5275 Viridiplantae
Traes_2DL_2A7F4D87B.1 T. aestivum v2.2 123428917 NLI interacting factor-like phosphatase, putative, expressed 5 5275 Viridiplantae
Traes_1DL_6DCAF6C80.2 T. aestivum v2.2 123428917 NLI interacting factor-like phosphatase, putative, expressed 5 5275 Viridiplantae