Gene : Cagra.0007s0036 C. grandiflora v1.1
Defline:  (1 of 1) PTHR31104:SF1 - GENOMIC DNA, CHROMOSOME 3, TAC CLONE:K15M2 Genomic Order:  36
Name:  ? Cagra.0007s0036 Secondary Identifier:  ? PAC:28903130
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0007s0036 0.5kb upstream 0.5kb upstream 2342 true Scaffold7: 123307-125648 Capsella grandiflora
Cagra.0007s0036 0.5kb upstream 0.5kb upstream 500 false Scaffold7: 123307-123806 Capsella grandiflora
Cagra.0007s0036 0.5kb downstream 0.5kb downstream 2342 true Scaffold7: 123807-126148 Capsella grandiflora
Cagra.0007s0036 0.5kb downstream 0.5kb downstream 500 false Scaffold7: 125649-126148 Capsella grandiflora
Cagra.0007s0036 1.0kb upstream 1.0kb upstream 2842 true Scaffold7: 122807-125648 Capsella grandiflora
Cagra.0007s0036 1.0kb upstream 1.0kb upstream 1000 false Scaffold7: 122807-123806 Capsella grandiflora
Cagra.0007s0036 1.0kb downstream 1.0kb downstream 2842 true Scaffold7: 123807-126648 Capsella grandiflora
Cagra.0007s0036 1.0kb downstream 1.0kb downstream 1000 false Scaffold7: 125649-126648 Capsella grandiflora
Cagra.0007s0036 2.0kb upstream 2.0kb upstream 3842 true Scaffold7: 121807-125648 Capsella grandiflora
Cagra.0007s0036 2.0kb upstream 2.0kb upstream 2000 false Scaffold7: 121807-123806 Capsella grandiflora
Cagra.0007s0036 2.0kb downstream 2.0kb downstream 3842 true Scaffold7: 123807-127648 Capsella grandiflora
Cagra.0007s0036 2.0kb downstream 2.0kb downstream 2000 false Scaffold7: 125649-127648 Capsella grandiflora
Cagra.0007s0036 5.0kb upstream 5.0kb upstream 6842 true Scaffold7: 118807-125648 Capsella grandiflora
Cagra.0007s0036 5.0kb upstream 5.0kb upstream 5000 false Scaffold7: 118807-123806 Capsella grandiflora
Cagra.0007s0036 5.0kb downstream 5.0kb downstream 6842 true Scaffold7: 123807-130648 Capsella grandiflora
Cagra.0007s0036 5.0kb downstream 5.0kb downstream 5000 false Scaffold7: 125649-130648 Capsella grandiflora
Cagra.0007s0036 10.0kb upstream 10.0kb upstream 11842 true Scaffold7: 113807-125648 Capsella grandiflora
Cagra.0007s0036 10.0kb upstream 10.0kb upstream 10000 false Scaffold7: 113807-123806 Capsella grandiflora
Cagra.0007s0036 10.0kb downstream 10.0kb downstream 11842 true Scaffold7: 123807-135648 Capsella grandiflora
Cagra.0007s0036 10.0kb downstream 10.0kb downstream 10000 false Scaffold7: 125649-135648 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372784 5261 Brassicaceae View MSA
123839595 5264 Brassicales-Malvales View MSA
124345963 5266 SBM View MSA
124254669 5268 Malvidae View MSA
124072866 5270 Rosid View MSA
123749062 5271 Pentapetalae View MSA
122793704 5272 Eudicot View MSA
122047638 5273 Angiosperm View MSA
121344579 5274 Embryophyte View MSA
123380069 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain