Gene : Cagra.0447s0015 C. grandiflora v1.1
Defline:  (1 of 5) PTHR33673:SF1 - GENOMIC DNA, CHROMOSOME 5, TAC CLONE:K3K3 Genomic Order:  15
Name:  ? Cagra.0447s0015 Secondary Identifier:  ? PAC:28914511
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0447s0015 0.5kb upstream 0.5kb upstream 1265 true Scaffold447: 51682-52946 Capsella grandiflora
Cagra.0447s0015 0.5kb upstream 0.5kb upstream 500 false Scaffold447: 52447-52946 Capsella grandiflora
Cagra.0447s0015 0.5kb downstream 0.5kb downstream 1265 true Scaffold447: 51182-52446 Capsella grandiflora
Cagra.0447s0015 0.5kb downstream 0.5kb downstream 500 false Scaffold447: 51182-51681 Capsella grandiflora
Cagra.0447s0015 1.0kb upstream 1.0kb upstream 1765 true Scaffold447: 51682-53446 Capsella grandiflora
Cagra.0447s0015 1.0kb upstream 1.0kb upstream 1000 false Scaffold447: 52447-53446 Capsella grandiflora
Cagra.0447s0015 1.0kb downstream 1.0kb downstream 1765 true Scaffold447: 50682-52446 Capsella grandiflora
Cagra.0447s0015 1.0kb downstream 1.0kb downstream 1000 false Scaffold447: 50682-51681 Capsella grandiflora
Cagra.0447s0015 2.0kb upstream 2.0kb upstream 2765 true Scaffold447: 51682-54446 Capsella grandiflora
Cagra.0447s0015 2.0kb upstream 2.0kb upstream 2000 false Scaffold447: 52447-54446 Capsella grandiflora
Cagra.0447s0015 2.0kb downstream 2.0kb downstream 2765 true Scaffold447: 49682-52446 Capsella grandiflora
Cagra.0447s0015 2.0kb downstream 2.0kb downstream 2000 false Scaffold447: 49682-51681 Capsella grandiflora
Cagra.0447s0015 5.0kb upstream 5.0kb upstream 5765 true Scaffold447: 51682-57446 Capsella grandiflora
Cagra.0447s0015 5.0kb upstream 5.0kb upstream 5000 false Scaffold447: 52447-57446 Capsella grandiflora
Cagra.0447s0015 5.0kb downstream 5.0kb downstream 5765 true Scaffold447: 46682-52446 Capsella grandiflora
Cagra.0447s0015 5.0kb downstream 5.0kb downstream 5000 false Scaffold447: 46682-51681 Capsella grandiflora
Cagra.0447s0015 10.0kb upstream 10.0kb upstream 9058 true Scaffold447: 51682-60739 Capsella grandiflora
Cagra.0447s0015 10.0kb upstream 10.0kb upstream 8293 false Scaffold447: 52447-60739 Capsella grandiflora
Cagra.0447s0015 10.0kb downstream 10.0kb downstream 10765 true Scaffold447: 41682-52446 Capsella grandiflora
Cagra.0447s0015 10.0kb downstream 10.0kb downstream 10000 false Scaffold447: 41682-51681 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122379488 5261 Brassicaceae View MSA
123838207 5264 Brassicales-Malvales View MSA
124322414 5266 SBM View MSA
124253062 5268 Malvidae View MSA
124071200 5270 Rosid View MSA
123751768 5271 Pentapetalae View MSA
122796743 5272 Eudicot View MSA
122047095 5273 Angiosperm View MSA
121310690 5274 Embryophyte View MSA
123348114 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain