Gene : Cagra.2935s0012 C. grandiflora v1.1
Defline:  (1 of 132) PF00847 - AP2 domain (AP2) Genomic Order:  12
Name:  ? Cagra.2935s0012 Secondary Identifier:  ? PAC:28907234
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2935s0012 0.5kb upstream 0.5kb upstream 1418 true Scaffold2935: 42767-44184 Capsella grandiflora
Cagra.2935s0012 0.5kb upstream 0.5kb upstream 500 false Scaffold2935: 42767-43266 Capsella grandiflora
Cagra.2935s0012 0.5kb downstream 0.5kb downstream 1418 true Scaffold2935: 43267-44684 Capsella grandiflora
Cagra.2935s0012 0.5kb downstream 0.5kb downstream 500 false Scaffold2935: 44185-44684 Capsella grandiflora
Cagra.2935s0012 1.0kb upstream 1.0kb upstream 1918 true Scaffold2935: 42267-44184 Capsella grandiflora
Cagra.2935s0012 1.0kb upstream 1.0kb upstream 1000 false Scaffold2935: 42267-43266 Capsella grandiflora
Cagra.2935s0012 1.0kb downstream 1.0kb downstream 1918 true Scaffold2935: 43267-45184 Capsella grandiflora
Cagra.2935s0012 1.0kb downstream 1.0kb downstream 1000 false Scaffold2935: 44185-45184 Capsella grandiflora
Cagra.2935s0012 2.0kb upstream 2.0kb upstream 2918 true Scaffold2935: 41267-44184 Capsella grandiflora
Cagra.2935s0012 2.0kb upstream 2.0kb upstream 2000 false Scaffold2935: 41267-43266 Capsella grandiflora
Cagra.2935s0012 2.0kb downstream 2.0kb downstream 2918 true Scaffold2935: 43267-46184 Capsella grandiflora
Cagra.2935s0012 2.0kb downstream 2.0kb downstream 2000 false Scaffold2935: 44185-46184 Capsella grandiflora
Cagra.2935s0012 5.0kb upstream 5.0kb upstream 5918 true Scaffold2935: 38267-44184 Capsella grandiflora
Cagra.2935s0012 5.0kb upstream 5.0kb upstream 5000 false Scaffold2935: 38267-43266 Capsella grandiflora
Cagra.2935s0012 5.0kb downstream 5.0kb downstream 5918 true Scaffold2935: 43267-49184 Capsella grandiflora
Cagra.2935s0012 5.0kb downstream 5.0kb downstream 5000 false Scaffold2935: 44185-49184 Capsella grandiflora
Cagra.2935s0012 10.0kb upstream 10.0kb upstream 10918 true Scaffold2935: 33267-44184 Capsella grandiflora
Cagra.2935s0012 10.0kb upstream 10.0kb upstream 10000 false Scaffold2935: 33267-43266 Capsella grandiflora
Cagra.2935s0012 10.0kb downstream 10.0kb downstream 10918 true Scaffold2935: 43267-54184 Capsella grandiflora
Cagra.2935s0012 10.0kb downstream 10.0kb downstream 10000 false Scaffold2935: 44185-54184 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362999 5261 Brassicaceae View MSA
123839190 5264 Brassicales-Malvales View MSA
124348328 5266 SBM View MSA
124253390 5268 Malvidae View MSA
124074692 5270 Rosid View MSA
123751069 5271 Pentapetalae View MSA
122793913 5272 Eudicot View MSA
122046946 5273 Angiosperm View MSA
123428898 5275 Viridiplantae View MSA
121351000 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain