Protein Family : Integrase-type DNA-binding superfamily protein 124253390

Method ID:  5268 Method Name:  Malvidae
Sequence Alignment:  View MSA Member Count:  24

24 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
29900.t000023 (1 of 113) PF00847 - AP2 domain (AP2) R. communis v0.1 741   29900: 141404-142144
orange1.1g037347m.g (1 of 119) PF00847 - AP2 domain (AP2) C. sinensis v1.1 888   scaffold00007: 400367-401254
AT4G18450 (1 of 141) PF00847 - AP2 domain (AP2) A. thaliana TAIR10 912   Chr4: 10190250-10191161
Thhalv10027536m.g (1 of 136) PF00847 - AP2 domain (AP2) E. salsugineum v1.0 882   scaffold_1: 9403091-9403972
Ciclev10018130m.g (1 of 128) PF00847 - AP2 domain (AP2) C. clementina v1.0 888   scaffold_2: 33906350-33907237
Lus10013958.g (1 of 230) PF00847 - AP2 domain (AP2) L. usitatissimum v1.0 765   scaffold820: 240544-241308
Lus10005281.g (1 of 230) PF00847 - AP2 domain (AP2) L. usitatissimum v1.0 756   scaffold109: 119299-120054
Gorai.008G219300 (1 of 258) PF00847 - AP2 domain (AP2) G. raimondii v2.1 770   Chr08: 50562298-50563067
Gorai.009G165400 (1 of 258) PF00847 - AP2 domain (AP2) G. raimondii v2.1 795   Chr09: 12704762-12705556
Gorai.010G156500 (1 of 258) PF00847 - AP2 domain (AP2) G. raimondii v2.1 804   Chr10: 43659431-43660234
Thecc1EG029772 (1 of 119) PF00847 - AP2 domain (AP2) T. cacao v1.1 1290   scaffold_6: 24261568-24262857
Araha.6257s0001 (1 of 86) PF00847 - AP2 domain (AP2) A. halleri v1.1 973   Scaffold6257: 160-1132
Cagra.2935s0012 (1 of 132) PF00847 - AP2 domain (AP2) C. grandiflora v1.1 918   Scaffold2935: 43267-44184
Brara.A00943 (1 of 279) PF00847 - AP2 domain (AP2) B. rapa FPsc v1.3 909   A01: 4950654-4951562
Bostr.30275s0319 (1 of 143) PF00847 - AP2 domain (AP2) B. stricta v1.2 912   Scaffold30275: 2014854-2015765
SapurV1A.0012s0900 (1 of 224) PF00847 - AP2 domain (AP2) S. purpurea v1.0 834   chr04: 3061695-3062528
Manes.16G034200 (1 of 193) PF00847 - AP2 domain (AP2) M. esculenta v6.1 795   Chromosome16: 3784656-3785450
Manes.17G051700 (1 of 193) PF00847 - AP2 domain (AP2) M. esculenta v6.1 1178   Chromosome17: 18894209-18895386
AL7G35840 (1 of 151) PF00847 - AP2 domain (AP2) A. lyrata v2.1 1635   scaffold_7: 10799641-10801275
Potri.004G051800 (1 of 209) PF00847 - AP2 domain (AP2) P. trichocarpa v3.1 1109   Chr04: 4034034-4035142
Potri.011G061800 (1 of 209) PF00847 - AP2 domain (AP2) P. trichocarpa v3.1 846   Chr11: 5505509-5506354
Podel.04G055700 (1 of 223) PF00847 - AP2 domain (AP2) P. deltoides WV94 v2.1 993   Chr04: 4647358-4648350
Podel.11G055900 (1 of 223) PF00847 - AP2 domain (AP2) P. deltoides WV94 v2.1 844   Chr11: 5205103-5205946
Carub.0007s2279 (1 of 146) PF00847 - AP2 domain (AP2) C. rubella v1.1 918   scaffold_7: 8616508-8617425

24 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
29900.m001561 R. communis v0.1 124253390 Integrase-type DNA-binding superfamily protein 1 5268 Malvidae
Thhalv10027536m E. salsugineum v1.0 124253390 Integrase-type DNA-binding superfamily protein 1 5268 Malvidae
Ciclev10018130m C. clementina v1.0 124253390 Integrase-type DNA-binding superfamily protein 1 5268 Malvidae
Lus10005281 L. usitatissimum v1.0 124253390 Integrase-type DNA-binding superfamily protein 2 5268 Malvidae
Gorai.008G219300.1 G. raimondii v2.1 124253390 Integrase-type DNA-binding superfamily protein 3 5268 Malvidae
Thecc1EG029772t1 T. cacao v1.1 124253390 Integrase-type DNA-binding superfamily protein 1 5268 Malvidae
SapurV1A.0012s0900.1.p S. purpurea v1.0 124253390 Integrase-type DNA-binding superfamily protein 1 5268 Malvidae
Potri.004G051800.1.p P. trichocarpa v3.1 124253390 Integrase-type DNA-binding superfamily protein 2 5268 Malvidae
Carub.0007s2279.1.p C. rubella v1.1 124253390 Integrase-type DNA-binding superfamily protein 1 5268 Malvidae
orange1.1g037347m C. sinensis v1.1 124253390 Integrase-type DNA-binding superfamily protein 1 5268 Malvidae
AT4G18450.1 A. thaliana TAIR10 124253390 Integrase-type DNA-binding superfamily protein 1 5268 Malvidae
Lus10013958 L. usitatissimum v1.0 124253390 Integrase-type DNA-binding superfamily protein 2 5268 Malvidae
Gorai.009G165400.1 G. raimondii v2.1 124253390 Integrase-type DNA-binding superfamily protein 3 5268 Malvidae
Gorai.010G156500.1 G. raimondii v2.1 124253390 Integrase-type DNA-binding superfamily protein 3 5268 Malvidae
Araha.6257s0001.1.p A. halleri v1.1 124253390 Integrase-type DNA-binding superfamily protein 1 5268 Malvidae
Cagra.2935s0012.1.p C. grandiflora v1.1 124253390 Integrase-type DNA-binding superfamily protein 1 5268 Malvidae
Brara.A00943.1.p B. rapa FPsc v1.3 124253390 Integrase-type DNA-binding superfamily protein 1 5268 Malvidae
Bostr.30275s0319.1.p B. stricta v1.2 124253390 Integrase-type DNA-binding superfamily protein 1 5268 Malvidae
Manes.16G034200.1.p M. esculenta v6.1 124253390 Integrase-type DNA-binding superfamily protein 2 5268 Malvidae
Manes.17G051700.1.p M. esculenta v6.1 124253390 Integrase-type DNA-binding superfamily protein 2 5268 Malvidae
AL7G35840.t1 A. lyrata v2.1 124253390 Integrase-type DNA-binding superfamily protein 1 5268 Malvidae
Potri.011G061800.1.p P. trichocarpa v3.1 124253390 Integrase-type DNA-binding superfamily protein 2 5268 Malvidae
Podel.11G055900.1.p P. deltoides WV94 v2.1 124253390 Integrase-type DNA-binding superfamily protein 2 5268 Malvidae
Podel.04G055700.1.p P. deltoides WV94 v2.1 124253390 Integrase-type DNA-binding superfamily protein 2 5268 Malvidae