Gene : Cagra.0327s0001 C. grandiflora v1.1
Genomic Order:  1 Name:  ? Cagra.0327s0001
Secondary Identifier:  ? PAC:28908250
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0327s0001 0.5kb upstream 0.5kb upstream 1854 true Scaffold327: 1-1854 Capsella grandiflora
Cagra.0327s0001 0.5kb upstream 0.5kb upstream 1 false Scaffold327: 1-1 Capsella grandiflora
Cagra.0327s0001 0.5kb downstream 0.5kb downstream 2353 true Scaffold327: 2-2354 Capsella grandiflora
Cagra.0327s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold327: 1855-2354 Capsella grandiflora
Cagra.0327s0001 1.0kb upstream 1.0kb upstream 1854 true Scaffold327: 1-1854 Capsella grandiflora
Cagra.0327s0001 1.0kb upstream 1.0kb upstream 1 false Scaffold327: 1-1 Capsella grandiflora
Cagra.0327s0001 1.0kb downstream 1.0kb downstream 2853 true Scaffold327: 2-2854 Capsella grandiflora
Cagra.0327s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold327: 1855-2854 Capsella grandiflora
Cagra.0327s0001 2.0kb upstream 2.0kb upstream 1854 true Scaffold327: 1-1854 Capsella grandiflora
Cagra.0327s0001 2.0kb upstream 2.0kb upstream 1 false Scaffold327: 1-1 Capsella grandiflora
Cagra.0327s0001 2.0kb downstream 2.0kb downstream 3853 true Scaffold327: 2-3854 Capsella grandiflora
Cagra.0327s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold327: 1855-3854 Capsella grandiflora
Cagra.0327s0001 5.0kb upstream 5.0kb upstream 1854 true Scaffold327: 1-1854 Capsella grandiflora
Cagra.0327s0001 5.0kb upstream 5.0kb upstream 1 false Scaffold327: 1-1 Capsella grandiflora
Cagra.0327s0001 5.0kb downstream 5.0kb downstream 6853 true Scaffold327: 2-6854 Capsella grandiflora
Cagra.0327s0001 5.0kb downstream 5.0kb downstream 5000 false Scaffold327: 1855-6854 Capsella grandiflora
Cagra.0327s0001 10.0kb upstream 10.0kb upstream 1854 true Scaffold327: 1-1854 Capsella grandiflora
Cagra.0327s0001 10.0kb upstream 10.0kb upstream 1 false Scaffold327: 1-1 Capsella grandiflora
Cagra.0327s0001 10.0kb downstream 10.0kb downstream 11853 true Scaffold327: 2-11854 Capsella grandiflora
Cagra.0327s0001 10.0kb downstream 10.0kb downstream 10000 false Scaffold327: 1855-11854 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122333516 5261 Brassicaceae Singleton cluster - no MSA
123774452 5264 Brassicales-Malvales Singleton cluster - no MSA
124272888 5266 SBM Singleton cluster - no MSA
124249690 5268 Malvidae View MSA
124066097 5270 Rosid View MSA
123744243 5271 Pentapetalae View MSA
122791191 5272 Eudicot View MSA
122047818 5273 Angiosperm View MSA
121348418 5274 Embryophyte View MSA
123380857 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain