Gene : Cagra.0056s0002 C. grandiflora v1.1
Genomic Order:  2 Name:  ? Cagra.0056s0002
Secondary Identifier:  ? PAC:28903248
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0056s0002 0.5kb upstream 0.5kb upstream 1296 true Scaffold56: 4255-5550 Capsella grandiflora
Cagra.0056s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold56: 4255-4754 Capsella grandiflora
Cagra.0056s0002 0.5kb downstream 0.5kb downstream 1296 true Scaffold56: 4755-6050 Capsella grandiflora
Cagra.0056s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold56: 5551-6050 Capsella grandiflora
Cagra.0056s0002 1.0kb upstream 1.0kb upstream 1796 true Scaffold56: 3755-5550 Capsella grandiflora
Cagra.0056s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold56: 3755-4754 Capsella grandiflora
Cagra.0056s0002 1.0kb downstream 1.0kb downstream 1796 true Scaffold56: 4755-6550 Capsella grandiflora
Cagra.0056s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold56: 5551-6550 Capsella grandiflora
Cagra.0056s0002 2.0kb upstream 2.0kb upstream 2796 true Scaffold56: 2755-5550 Capsella grandiflora
Cagra.0056s0002 2.0kb upstream 2.0kb upstream 2000 false Scaffold56: 2755-4754 Capsella grandiflora
Cagra.0056s0002 2.0kb downstream 2.0kb downstream 2796 true Scaffold56: 4755-7550 Capsella grandiflora
Cagra.0056s0002 2.0kb downstream 2.0kb downstream 2000 false Scaffold56: 5551-7550 Capsella grandiflora
Cagra.0056s0002 5.0kb upstream 5.0kb upstream 5550 true Scaffold56: 1-5550 Capsella grandiflora
Cagra.0056s0002 5.0kb upstream 5.0kb upstream 4754 false Scaffold56: 1-4754 Capsella grandiflora
Cagra.0056s0002 5.0kb downstream 5.0kb downstream 5796 true Scaffold56: 4755-10550 Capsella grandiflora
Cagra.0056s0002 5.0kb downstream 5.0kb downstream 5000 false Scaffold56: 5551-10550 Capsella grandiflora
Cagra.0056s0002 10.0kb upstream 10.0kb upstream 5550 true Scaffold56: 1-5550 Capsella grandiflora
Cagra.0056s0002 10.0kb upstream 10.0kb upstream 4754 false Scaffold56: 1-4754 Capsella grandiflora
Cagra.0056s0002 10.0kb downstream 10.0kb downstream 10796 true Scaffold56: 4755-15550 Capsella grandiflora
Cagra.0056s0002 10.0kb downstream 10.0kb downstream 10000 false Scaffold56: 5551-15550 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378208 5261 Brassicaceae View MSA
123801786 5264 Brassicales-Malvales View MSA
124346719 5266 SBM View MSA
124246312 5268 Malvidae View MSA
124069293 5270 Rosid View MSA
123742144 5271 Pentapetalae View MSA
122795490 5272 Eudicot View MSA
122049393 5273 Angiosperm View MSA
121345648 5274 Embryophyte View MSA
123425550 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain