Gene : Cagra.0050s0078 C. grandiflora v1.1
Defline:  (1 of 2) 1.14.19.4 - Delta(8)-fatty-acid desaturase / SLD Genomic Order:  78
Name:  ? Cagra.0050s0078 Secondary Identifier:  ? PAC:28917067
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-7601 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0050s0078 0.5kb upstream 0.5kb upstream 1850 true Scaffold50: 330398-332247 Capsella grandiflora
Cagra.0050s0078 0.5kb upstream 0.5kb upstream 500 false Scaffold50: 331748-332247 Capsella grandiflora
Cagra.0050s0078 0.5kb downstream 0.5kb downstream 1850 true Scaffold50: 329898-331747 Capsella grandiflora
Cagra.0050s0078 0.5kb downstream 0.5kb downstream 500 false Scaffold50: 329898-330397 Capsella grandiflora
Cagra.0050s0078 1.0kb upstream 1.0kb upstream 2350 true Scaffold50: 330398-332747 Capsella grandiflora
Cagra.0050s0078 1.0kb upstream 1.0kb upstream 1000 false Scaffold50: 331748-332747 Capsella grandiflora
Cagra.0050s0078 1.0kb downstream 1.0kb downstream 2350 true Scaffold50: 329398-331747 Capsella grandiflora
Cagra.0050s0078 1.0kb downstream 1.0kb downstream 1000 false Scaffold50: 329398-330397 Capsella grandiflora
Cagra.0050s0078 2.0kb upstream 2.0kb upstream 3350 true Scaffold50: 330398-333747 Capsella grandiflora
Cagra.0050s0078 2.0kb upstream 2.0kb upstream 2000 false Scaffold50: 331748-333747 Capsella grandiflora
Cagra.0050s0078 2.0kb downstream 2.0kb downstream 3350 true Scaffold50: 328398-331747 Capsella grandiflora
Cagra.0050s0078 2.0kb downstream 2.0kb downstream 2000 false Scaffold50: 328398-330397 Capsella grandiflora
Cagra.0050s0078 5.0kb upstream 5.0kb upstream 6350 true Scaffold50: 330398-336747 Capsella grandiflora
Cagra.0050s0078 5.0kb upstream 5.0kb upstream 5000 false Scaffold50: 331748-336747 Capsella grandiflora
Cagra.0050s0078 5.0kb downstream 5.0kb downstream 6350 true Scaffold50: 325398-331747 Capsella grandiflora
Cagra.0050s0078 5.0kb downstream 5.0kb downstream 5000 false Scaffold50: 325398-330397 Capsella grandiflora
Cagra.0050s0078 10.0kb upstream 10.0kb upstream 11350 true Scaffold50: 330398-341747 Capsella grandiflora
Cagra.0050s0078 10.0kb upstream 10.0kb upstream 10000 false Scaffold50: 331748-341747 Capsella grandiflora
Cagra.0050s0078 10.0kb downstream 10.0kb downstream 11350 true Scaffold50: 320398-331747 Capsella grandiflora
Cagra.0050s0078 10.0kb downstream 10.0kb downstream 10000 false Scaffold50: 320398-330397 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122047499 5273 Angiosperm View MSA
122374539 5261 Brassicaceae View MSA
123840551 5264 Brassicales-Malvales View MSA
124345527 5266 SBM View MSA
124238408 5268 Malvidae View MSA
124071375 5270 Rosid View MSA
123743417 5271 Pentapetalae View MSA
122792306 5272 Eudicot View MSA
121347259 5274 Embryophyte View MSA
123427370 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain