Gene : Cagra.3388s0004 C. grandiflora v1.1
Defline:  (1 of 64) PTHR32410:SF152 - C1 DOMAIN-CONTAINING PROTEIN-RELATED Genomic Order:  4
Name:  ? Cagra.3388s0004 Secondary Identifier:  ? PAC:28919482
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.3388s0004 0.5kb upstream 0.5kb upstream 4079 true Scaffold3388: 17632-21710 Capsella grandiflora
Cagra.3388s0004 0.5kb upstream 0.5kb upstream 500 false Scaffold3388: 17632-18131 Capsella grandiflora
Cagra.3388s0004 0.5kb downstream 0.5kb downstream 4079 true Scaffold3388: 18132-22210 Capsella grandiflora
Cagra.3388s0004 0.5kb downstream 0.5kb downstream 500 false Scaffold3388: 21711-22210 Capsella grandiflora
Cagra.3388s0004 1.0kb upstream 1.0kb upstream 4579 true Scaffold3388: 17132-21710 Capsella grandiflora
Cagra.3388s0004 1.0kb upstream 1.0kb upstream 1000 false Scaffold3388: 17132-18131 Capsella grandiflora
Cagra.3388s0004 1.0kb downstream 1.0kb downstream 4579 true Scaffold3388: 18132-22710 Capsella grandiflora
Cagra.3388s0004 1.0kb downstream 1.0kb downstream 1000 false Scaffold3388: 21711-22710 Capsella grandiflora
Cagra.3388s0004 2.0kb upstream 2.0kb upstream 5579 true Scaffold3388: 16132-21710 Capsella grandiflora
Cagra.3388s0004 2.0kb upstream 2.0kb upstream 2000 false Scaffold3388: 16132-18131 Capsella grandiflora
Cagra.3388s0004 2.0kb downstream 2.0kb downstream 5579 true Scaffold3388: 18132-23710 Capsella grandiflora
Cagra.3388s0004 2.0kb downstream 2.0kb downstream 2000 false Scaffold3388: 21711-23710 Capsella grandiflora
Cagra.3388s0004 5.0kb upstream 5.0kb upstream 8579 true Scaffold3388: 13132-21710 Capsella grandiflora
Cagra.3388s0004 5.0kb upstream 5.0kb upstream 5000 false Scaffold3388: 13132-18131 Capsella grandiflora
Cagra.3388s0004 5.0kb downstream 5.0kb downstream 8579 true Scaffold3388: 18132-26710 Capsella grandiflora
Cagra.3388s0004 5.0kb downstream 5.0kb downstream 5000 false Scaffold3388: 21711-26710 Capsella grandiflora
Cagra.3388s0004 10.0kb upstream 10.0kb upstream 13579 true Scaffold3388: 8132-21710 Capsella grandiflora
Cagra.3388s0004 10.0kb upstream 10.0kb upstream 10000 false Scaffold3388: 8132-18131 Capsella grandiflora
Cagra.3388s0004 10.0kb downstream 10.0kb downstream 13579 true Scaffold3388: 18132-31710 Capsella grandiflora
Cagra.3388s0004 10.0kb downstream 10.0kb downstream 10000 false Scaffold3388: 21711-31710 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380493 5261 Brassicaceae View MSA
123802745 5264 Brassicales-Malvales View MSA
124299913 5266 SBM View MSA
124151214 5268 Malvidae View MSA
123876695 5270 Rosid View MSA
123751823 5271 Pentapetalae View MSA
122797568 5272 Eudicot View MSA
122051127 5273 Angiosperm View MSA
121351229 5274 Embryophyte View MSA
123382066 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain