Gene : Cagra.3678s0008 C. grandiflora v1.1
Defline:  (1 of 27) PF05553 - Cotton fibre expressed protein (DUF761) Genomic Order:  8
Name:  ? Cagra.3678s0008 Secondary Identifier:  ? PAC:28908307
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.3678s0008 0.5kb upstream 0.5kb upstream 1389 true Scaffold3678: 29176-30564 Capsella grandiflora
Cagra.3678s0008 0.5kb upstream 0.5kb upstream 500 false Scaffold3678: 29176-29675 Capsella grandiflora
Cagra.3678s0008 0.5kb downstream 0.5kb downstream 1389 true Scaffold3678: 29676-31064 Capsella grandiflora
Cagra.3678s0008 0.5kb downstream 0.5kb downstream 500 false Scaffold3678: 30565-31064 Capsella grandiflora
Cagra.3678s0008 1.0kb upstream 1.0kb upstream 1889 true Scaffold3678: 28676-30564 Capsella grandiflora
Cagra.3678s0008 1.0kb upstream 1.0kb upstream 1000 false Scaffold3678: 28676-29675 Capsella grandiflora
Cagra.3678s0008 1.0kb downstream 1.0kb downstream 1889 true Scaffold3678: 29676-31564 Capsella grandiflora
Cagra.3678s0008 1.0kb downstream 1.0kb downstream 1000 false Scaffold3678: 30565-31564 Capsella grandiflora
Cagra.3678s0008 2.0kb upstream 2.0kb upstream 2889 true Scaffold3678: 27676-30564 Capsella grandiflora
Cagra.3678s0008 2.0kb upstream 2.0kb upstream 2000 false Scaffold3678: 27676-29675 Capsella grandiflora
Cagra.3678s0008 2.0kb downstream 2.0kb downstream 2889 true Scaffold3678: 29676-32564 Capsella grandiflora
Cagra.3678s0008 2.0kb downstream 2.0kb downstream 2000 false Scaffold3678: 30565-32564 Capsella grandiflora
Cagra.3678s0008 5.0kb upstream 5.0kb upstream 5889 true Scaffold3678: 24676-30564 Capsella grandiflora
Cagra.3678s0008 5.0kb upstream 5.0kb upstream 5000 false Scaffold3678: 24676-29675 Capsella grandiflora
Cagra.3678s0008 5.0kb downstream 5.0kb downstream 5889 true Scaffold3678: 29676-35564 Capsella grandiflora
Cagra.3678s0008 5.0kb downstream 5.0kb downstream 5000 false Scaffold3678: 30565-35564 Capsella grandiflora
Cagra.3678s0008 10.0kb upstream 10.0kb upstream 10889 true Scaffold3678: 19676-30564 Capsella grandiflora
Cagra.3678s0008 10.0kb upstream 10.0kb upstream 10000 false Scaffold3678: 19676-29675 Capsella grandiflora
Cagra.3678s0008 10.0kb downstream 10.0kb downstream 10889 true Scaffold3678: 29676-40564 Capsella grandiflora
Cagra.3678s0008 10.0kb downstream 10.0kb downstream 10000 false Scaffold3678: 30565-40564 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027233 5273 Angiosperm View MSA
122375272 5261 Brassicaceae View MSA
123836678 5264 Brassicales-Malvales View MSA
124350105 5266 SBM View MSA
124253667 5268 Malvidae View MSA
124064960 5270 Rosid View MSA
123738835 5271 Pentapetalae View MSA
122769934 5272 Eudicot View MSA
121296919 5274 Embryophyte View MSA
123335025 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain