Gene : Cagra.3807s0056 C. grandiflora v1.1
Defline:  (1 of 27) PF01535//PF12854//PF13041 - PPR repeat (PPR) // PPR repeat (PPR_1) // PPR repeat family (PPR_2) Genomic Order:  56
Name:  ? Cagra.3807s0056 Secondary Identifier:  ? PAC:28899159
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.3807s0056 0.5kb upstream 0.5kb upstream 3845 true Scaffold3807: 205891-209735 Capsella grandiflora
Cagra.3807s0056 0.5kb upstream 0.5kb upstream 500 false Scaffold3807: 205891-206390 Capsella grandiflora
Cagra.3807s0056 0.5kb downstream 0.5kb downstream 3845 true Scaffold3807: 206391-210235 Capsella grandiflora
Cagra.3807s0056 0.5kb downstream 0.5kb downstream 500 false Scaffold3807: 209736-210235 Capsella grandiflora
Cagra.3807s0056 1.0kb upstream 1.0kb upstream 4345 true Scaffold3807: 205391-209735 Capsella grandiflora
Cagra.3807s0056 1.0kb upstream 1.0kb upstream 1000 false Scaffold3807: 205391-206390 Capsella grandiflora
Cagra.3807s0056 1.0kb downstream 1.0kb downstream 4345 true Scaffold3807: 206391-210735 Capsella grandiflora
Cagra.3807s0056 1.0kb downstream 1.0kb downstream 1000 false Scaffold3807: 209736-210735 Capsella grandiflora
Cagra.3807s0056 2.0kb upstream 2.0kb upstream 5345 true Scaffold3807: 204391-209735 Capsella grandiflora
Cagra.3807s0056 2.0kb upstream 2.0kb upstream 2000 false Scaffold3807: 204391-206390 Capsella grandiflora
Cagra.3807s0056 2.0kb downstream 2.0kb downstream 5345 true Scaffold3807: 206391-211735 Capsella grandiflora
Cagra.3807s0056 2.0kb downstream 2.0kb downstream 2000 false Scaffold3807: 209736-211735 Capsella grandiflora
Cagra.3807s0056 5.0kb upstream 5.0kb upstream 8345 true Scaffold3807: 201391-209735 Capsella grandiflora
Cagra.3807s0056 5.0kb upstream 5.0kb upstream 5000 false Scaffold3807: 201391-206390 Capsella grandiflora
Cagra.3807s0056 5.0kb downstream 5.0kb downstream 8345 true Scaffold3807: 206391-214735 Capsella grandiflora
Cagra.3807s0056 5.0kb downstream 5.0kb downstream 5000 false Scaffold3807: 209736-214735 Capsella grandiflora
Cagra.3807s0056 10.0kb upstream 10.0kb upstream 13345 true Scaffold3807: 196391-209735 Capsella grandiflora
Cagra.3807s0056 10.0kb upstream 10.0kb upstream 10000 false Scaffold3807: 196391-206390 Capsella grandiflora
Cagra.3807s0056 10.0kb downstream 10.0kb downstream 13345 true Scaffold3807: 206391-219735 Capsella grandiflora
Cagra.3807s0056 10.0kb downstream 10.0kb downstream 10000 false Scaffold3807: 209736-219735 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374594 5261 Brassicaceae View MSA
123833894 5264 Brassicales-Malvales View MSA
124337081 5266 SBM View MSA
124237544 5268 Malvidae View MSA
124068789 5270 Rosid View MSA
123737281 5271 Pentapetalae View MSA
122788345 5272 Eudicot View MSA
122045330 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351195 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain