Gene : Cagra.0381s0001 C. grandiflora v1.1
Defline:  (1 of 2) PTHR14493:SF53 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 2-RELATED Genomic Order:  1
Name:  ? Cagra.0381s0001 Secondary Identifier:  ? PAC:28893717
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0381s0001 0.5kb upstream 0.5kb upstream 1478 true Scaffold381: 993-2470 Capsella grandiflora
Cagra.0381s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold381: 993-1492 Capsella grandiflora
Cagra.0381s0001 0.5kb downstream 0.5kb downstream 1478 true Scaffold381: 1493-2970 Capsella grandiflora
Cagra.0381s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold381: 2471-2970 Capsella grandiflora
Cagra.0381s0001 1.0kb upstream 1.0kb upstream 1978 true Scaffold381: 493-2470 Capsella grandiflora
Cagra.0381s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold381: 493-1492 Capsella grandiflora
Cagra.0381s0001 1.0kb downstream 1.0kb downstream 1978 true Scaffold381: 1493-3470 Capsella grandiflora
Cagra.0381s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold381: 2471-3470 Capsella grandiflora
Cagra.0381s0001 2.0kb upstream 2.0kb upstream 2470 true Scaffold381: 1-2470 Capsella grandiflora
Cagra.0381s0001 2.0kb upstream 2.0kb upstream 1492 false Scaffold381: 1-1492 Capsella grandiflora
Cagra.0381s0001 2.0kb downstream 2.0kb downstream 2978 true Scaffold381: 1493-4470 Capsella grandiflora
Cagra.0381s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold381: 2471-4470 Capsella grandiflora
Cagra.0381s0001 5.0kb upstream 5.0kb upstream 2470 true Scaffold381: 1-2470 Capsella grandiflora
Cagra.0381s0001 5.0kb upstream 5.0kb upstream 1492 false Scaffold381: 1-1492 Capsella grandiflora
Cagra.0381s0001 5.0kb downstream 5.0kb downstream 5978 true Scaffold381: 1493-7470 Capsella grandiflora
Cagra.0381s0001 5.0kb downstream 5.0kb downstream 5000 false Scaffold381: 2471-7470 Capsella grandiflora
Cagra.0381s0001 10.0kb upstream 10.0kb upstream 2470 true Scaffold381: 1-2470 Capsella grandiflora
Cagra.0381s0001 10.0kb upstream 10.0kb upstream 1492 false Scaffold381: 1-1492 Capsella grandiflora
Cagra.0381s0001 10.0kb downstream 10.0kb downstream 10978 true Scaffold381: 1493-12470 Capsella grandiflora
Cagra.0381s0001 10.0kb downstream 10.0kb downstream 10000 false Scaffold381: 2471-12470 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378832 5261 Brassicaceae View MSA
123837623 5264 Brassicales-Malvales View MSA
124344221 5266 SBM View MSA
124254194 5268 Malvidae View MSA
124066464 5270 Rosid View MSA
123752127 5271 Pentapetalae View MSA
122796629 5272 Eudicot View MSA
122048745 5273 Angiosperm View MSA
123429052 5275 Viridiplantae View MSA
121351105 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain