Gene : Cagra.3745s0017 C. grandiflora v1.1
Defline:  (1 of 43) PF13912 - C2H2-type zinc finger (zf-C2H2_6) Genomic Order:  17
Name:  ? Cagra.3745s0017 Secondary Identifier:  ? PAC:28912974
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.3745s0017 0.5kb upstream 0.5kb upstream 1970 true Scaffold3745: 55863-57832 Capsella grandiflora
Cagra.3745s0017 0.5kb upstream 0.5kb upstream 500 false Scaffold3745: 55863-56362 Capsella grandiflora
Cagra.3745s0017 0.5kb downstream 0.5kb downstream 1970 true Scaffold3745: 56363-58332 Capsella grandiflora
Cagra.3745s0017 0.5kb downstream 0.5kb downstream 500 false Scaffold3745: 57833-58332 Capsella grandiflora
Cagra.3745s0017 1.0kb upstream 1.0kb upstream 2470 true Scaffold3745: 55363-57832 Capsella grandiflora
Cagra.3745s0017 1.0kb upstream 1.0kb upstream 1000 false Scaffold3745: 55363-56362 Capsella grandiflora
Cagra.3745s0017 1.0kb downstream 1.0kb downstream 2470 true Scaffold3745: 56363-58832 Capsella grandiflora
Cagra.3745s0017 1.0kb downstream 1.0kb downstream 1000 false Scaffold3745: 57833-58832 Capsella grandiflora
Cagra.3745s0017 2.0kb upstream 2.0kb upstream 3470 true Scaffold3745: 54363-57832 Capsella grandiflora
Cagra.3745s0017 2.0kb upstream 2.0kb upstream 2000 false Scaffold3745: 54363-56362 Capsella grandiflora
Cagra.3745s0017 2.0kb downstream 2.0kb downstream 3470 true Scaffold3745: 56363-59832 Capsella grandiflora
Cagra.3745s0017 2.0kb downstream 2.0kb downstream 2000 false Scaffold3745: 57833-59832 Capsella grandiflora
Cagra.3745s0017 5.0kb upstream 5.0kb upstream 6470 true Scaffold3745: 51363-57832 Capsella grandiflora
Cagra.3745s0017 5.0kb upstream 5.0kb upstream 5000 false Scaffold3745: 51363-56362 Capsella grandiflora
Cagra.3745s0017 5.0kb downstream 5.0kb downstream 6470 true Scaffold3745: 56363-62832 Capsella grandiflora
Cagra.3745s0017 5.0kb downstream 5.0kb downstream 5000 false Scaffold3745: 57833-62832 Capsella grandiflora
Cagra.3745s0017 10.0kb upstream 10.0kb upstream 11470 true Scaffold3745: 46363-57832 Capsella grandiflora
Cagra.3745s0017 10.0kb upstream 10.0kb upstream 10000 false Scaffold3745: 46363-56362 Capsella grandiflora
Cagra.3745s0017 10.0kb downstream 10.0kb downstream 11470 true Scaffold3745: 56363-67832 Capsella grandiflora
Cagra.3745s0017 10.0kb downstream 10.0kb downstream 10000 false Scaffold3745: 57833-67832 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360980 5261 Brassicaceae View MSA
123839422 5264 Brassicales-Malvales View MSA
124342047 5266 SBM View MSA
124248505 5268 Malvidae View MSA
124070419 5270 Rosid View MSA
123743866 5271 Pentapetalae View MSA
122796757 5272 Eudicot View MSA
122051585 5273 Angiosperm View MSA
121348252 5274 Embryophyte View MSA
123380791 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain