Gene : Cagra.4033s0002 C. grandiflora v1.1
Defline:  (1 of 137) PTHR31790:SF10 - F-BOX ASSOCIATED UBIQUITINATION EFFECTOR FAMILY PROTEIN-RELATED Genomic Order:  2
Name:  ? Cagra.4033s0002 Secondary Identifier:  ? PAC:28914997
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.4033s0002 0.5kb upstream 0.5kb upstream 1643 true Scaffold4033: 2883-4525 Capsella grandiflora
Cagra.4033s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold4033: 4026-4525 Capsella grandiflora
Cagra.4033s0002 0.5kb downstream 0.5kb downstream 1643 true Scaffold4033: 2383-4025 Capsella grandiflora
Cagra.4033s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold4033: 2383-2882 Capsella grandiflora
Cagra.4033s0002 1.0kb upstream 1.0kb upstream 2143 true Scaffold4033: 2883-5025 Capsella grandiflora
Cagra.4033s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold4033: 4026-5025 Capsella grandiflora
Cagra.4033s0002 1.0kb downstream 1.0kb downstream 2143 true Scaffold4033: 1883-4025 Capsella grandiflora
Cagra.4033s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold4033: 1883-2882 Capsella grandiflora
Cagra.4033s0002 2.0kb upstream 2.0kb upstream 3143 true Scaffold4033: 2883-6025 Capsella grandiflora
Cagra.4033s0002 2.0kb upstream 2.0kb upstream 2000 false Scaffold4033: 4026-6025 Capsella grandiflora
Cagra.4033s0002 2.0kb downstream 2.0kb downstream 3143 true Scaffold4033: 883-4025 Capsella grandiflora
Cagra.4033s0002 2.0kb downstream 2.0kb downstream 2000 false Scaffold4033: 883-2882 Capsella grandiflora
Cagra.4033s0002 5.0kb upstream 5.0kb upstream 6143 true Scaffold4033: 2883-9025 Capsella grandiflora
Cagra.4033s0002 5.0kb upstream 5.0kb upstream 5000 false Scaffold4033: 4026-9025 Capsella grandiflora
Cagra.4033s0002 5.0kb downstream 5.0kb downstream 4025 true Scaffold4033: 1-4025 Capsella grandiflora
Cagra.4033s0002 5.0kb downstream 5.0kb downstream 2882 false Scaffold4033: 1-2882 Capsella grandiflora
Cagra.4033s0002 10.0kb upstream 10.0kb upstream 11143 true Scaffold4033: 2883-14025 Capsella grandiflora
Cagra.4033s0002 10.0kb upstream 10.0kb upstream 10000 false Scaffold4033: 4026-14025 Capsella grandiflora
Cagra.4033s0002 10.0kb downstream 10.0kb downstream 4025 true Scaffold4033: 1-4025 Capsella grandiflora
Cagra.4033s0002 10.0kb downstream 10.0kb downstream 2882 false Scaffold4033: 1-2882 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122381584 5261 Brassicaceae View MSA
123803325 5264 Brassicales-Malvales View MSA
124300441 5266 SBM View MSA
124151628 5268 Malvidae View MSA
124074667 5270 Rosid View MSA
123753263 5271 Pentapetalae View MSA
122797953 5272 Eudicot View MSA
122051694 5273 Angiosperm View MSA
121351156 5274 Embryophyte View MSA
123382030 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain