Gene : Cagra.0454s0002 C. grandiflora v1.1
Defline:  (1 of 4) PTHR11730:SF39 - AMMONIUM TRANSPORTER 1 MEMBER 2 Genomic Order:  2
Name:  ? Cagra.0454s0002 Secondary Identifier:  ? PAC:28909959
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0454s0002 0.5kb upstream 0.5kb upstream 1997 true Scaffold454: 5603-7599 Capsella grandiflora
Cagra.0454s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold454: 7100-7599 Capsella grandiflora
Cagra.0454s0002 0.5kb downstream 0.5kb downstream 1997 true Scaffold454: 5103-7099 Capsella grandiflora
Cagra.0454s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold454: 5103-5602 Capsella grandiflora
Cagra.0454s0002 1.0kb upstream 1.0kb upstream 2497 true Scaffold454: 5603-8099 Capsella grandiflora
Cagra.0454s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold454: 7100-8099 Capsella grandiflora
Cagra.0454s0002 1.0kb downstream 1.0kb downstream 2497 true Scaffold454: 4603-7099 Capsella grandiflora
Cagra.0454s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold454: 4603-5602 Capsella grandiflora
Cagra.0454s0002 2.0kb upstream 2.0kb upstream 3497 true Scaffold454: 5603-9099 Capsella grandiflora
Cagra.0454s0002 2.0kb upstream 2.0kb upstream 2000 false Scaffold454: 7100-9099 Capsella grandiflora
Cagra.0454s0002 2.0kb downstream 2.0kb downstream 3497 true Scaffold454: 3603-7099 Capsella grandiflora
Cagra.0454s0002 2.0kb downstream 2.0kb downstream 2000 false Scaffold454: 3603-5602 Capsella grandiflora
Cagra.0454s0002 5.0kb upstream 5.0kb upstream 6497 true Scaffold454: 5603-12099 Capsella grandiflora
Cagra.0454s0002 5.0kb upstream 5.0kb upstream 5000 false Scaffold454: 7100-12099 Capsella grandiflora
Cagra.0454s0002 5.0kb downstream 5.0kb downstream 6497 true Scaffold454: 603-7099 Capsella grandiflora
Cagra.0454s0002 5.0kb downstream 5.0kb downstream 5000 false Scaffold454: 603-5602 Capsella grandiflora
Cagra.0454s0002 10.0kb upstream 10.0kb upstream 11497 true Scaffold454: 5603-17099 Capsella grandiflora
Cagra.0454s0002 10.0kb upstream 10.0kb upstream 10000 false Scaffold454: 7100-17099 Capsella grandiflora
Cagra.0454s0002 10.0kb downstream 10.0kb downstream 7099 true Scaffold454: 1-7099 Capsella grandiflora
Cagra.0454s0002 10.0kb downstream 10.0kb downstream 5602 false Scaffold454: 1-5602 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375380 5261 Brassicaceae View MSA
123800943 5264 Brassicales-Malvales View MSA
124298298 5266 SBM View MSA
124149971 5268 Malvidae View MSA
123875677 5270 Rosid View MSA
123459462 5271 Pentapetalae View MSA
122796645 5272 Eudicot View MSA
122042799 5273 Angiosperm View MSA
121344623 5274 Embryophyte View MSA
123426943 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain