Gene : Cagra.4031s0046 C. grandiflora v1.1
Defline:  (1 of 3) PTHR21569//PTHR21569:SF6 - RIBOSOMAL PROTEIN S9 Genomic Order:  46
Name:  ? Cagra.4031s0046 Secondary Identifier:  ? PAC:28904319
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.4031s0046 0.5kb upstream 0.5kb upstream 1192 true Scaffold4031: 152514-153705 Capsella grandiflora
Cagra.4031s0046 0.5kb upstream 0.5kb upstream 500 false Scaffold4031: 152514-153013 Capsella grandiflora
Cagra.4031s0046 0.5kb downstream 0.5kb downstream 1192 true Scaffold4031: 153014-154205 Capsella grandiflora
Cagra.4031s0046 0.5kb downstream 0.5kb downstream 500 false Scaffold4031: 153706-154205 Capsella grandiflora
Cagra.4031s0046 1.0kb upstream 1.0kb upstream 1692 true Scaffold4031: 152014-153705 Capsella grandiflora
Cagra.4031s0046 1.0kb upstream 1.0kb upstream 1000 false Scaffold4031: 152014-153013 Capsella grandiflora
Cagra.4031s0046 1.0kb downstream 1.0kb downstream 1692 true Scaffold4031: 153014-154705 Capsella grandiflora
Cagra.4031s0046 1.0kb downstream 1.0kb downstream 1000 false Scaffold4031: 153706-154705 Capsella grandiflora
Cagra.4031s0046 2.0kb upstream 2.0kb upstream 2692 true Scaffold4031: 151014-153705 Capsella grandiflora
Cagra.4031s0046 2.0kb upstream 2.0kb upstream 2000 false Scaffold4031: 151014-153013 Capsella grandiflora
Cagra.4031s0046 2.0kb downstream 2.0kb downstream 2692 true Scaffold4031: 153014-155705 Capsella grandiflora
Cagra.4031s0046 2.0kb downstream 2.0kb downstream 2000 false Scaffold4031: 153706-155705 Capsella grandiflora
Cagra.4031s0046 5.0kb upstream 5.0kb upstream 5692 true Scaffold4031: 148014-153705 Capsella grandiflora
Cagra.4031s0046 5.0kb upstream 5.0kb upstream 5000 false Scaffold4031: 148014-153013 Capsella grandiflora
Cagra.4031s0046 5.0kb downstream 5.0kb downstream 5692 true Scaffold4031: 153014-158705 Capsella grandiflora
Cagra.4031s0046 5.0kb downstream 5.0kb downstream 5000 false Scaffold4031: 153706-158705 Capsella grandiflora
Cagra.4031s0046 10.0kb upstream 10.0kb upstream 10692 true Scaffold4031: 143014-153705 Capsella grandiflora
Cagra.4031s0046 10.0kb upstream 10.0kb upstream 10000 false Scaffold4031: 143014-153013 Capsella grandiflora
Cagra.4031s0046 10.0kb downstream 10.0kb downstream 10692 true Scaffold4031: 153014-163705 Capsella grandiflora
Cagra.4031s0046 10.0kb downstream 10.0kb downstream 10000 false Scaffold4031: 153706-163705 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375892 5261 Brassicaceae View MSA
123840261 5264 Brassicales-Malvales View MSA
124350544 5266 SBM View MSA
124243493 5268 Malvidae View MSA
124069246 5270 Rosid View MSA
123741428 5271 Pentapetalae View MSA
122794496 5272 Eudicot View MSA
122042530 5273 Angiosperm View MSA
121347858 5274 Embryophyte View MSA
123423904 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain