Protein : Cagra.3954s0012.1.p C. grandiflora v1.1
Secondary Identifier:  PAC:28903026 Organism Name:  Capsella grandiflora
Length:  978   Name:  Cagra.3954s0012.1.p
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SummaryProteinsOther
 

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Proteins

9 Protein Domains

DB identifier Type Name
IPR002318 Family Alanine-tRNA ligase, class IIc
IPR003156 Domain DHHA1 domain
IPR018162 Domain Alanine-tRNA ligase, class IIc, anti-codon-binding domain
IPR013750 Domain GHMP kinase, C-terminal domain
IPR009000 Domain Translation protein, beta-barrel domain
IPR012947 Domain Threonyl/alanyl tRNA synthetase, SAD
IPR018163 Domain Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain
IPR018165 Domain Alanyl-tRNA synthetase, class IIc, core domain
IPR018164 Domain Alanyl-tRNA synthetase, class IIc, N-terminal
 

Other

1 CDSs

DB identifier Length Chromosome Location
Organism . Name
Cagra.3954s0012.1_CDS 2937   Scaffold3954: 61855-65952 Capsella grandiflora

36 Ontology Annotations

Ontology Term Db Gene/Protein Name
GO:0003676 GO Cagra.3954s0012.1.p
GO:0000166 GO Cagra.3954s0012.1.p
GO:0005524 GO Cagra.3954s0012.1.p
GO:0004813 GO Cagra.3954s0012.1.p
G3DSA:3.30.70.890 GENE3D Cagra.3954s0012.1.p
6.1.1.7 ENZYME Cagra.3954s0012.1.p
GO:0043039 GO Cagra.3954s0012.1.p
IPR002318 InterPro Cagra.3954s0012.1.p
GO:0006412 GO Cagra.3954s0012.1.p
GO:0005737 GO Cagra.3954s0012.1.p
GO:0016876 GO Cagra.3954s0012.1.p
GO:0006419 GO Cagra.3954s0012.1.p
IPR018162 InterPro Cagra.3954s0012.1.p
IPR018163 InterPro Cagra.3954s0012.1.p
IPR009000 InterPro Cagra.3954s0012.1.p
IPR003156 InterPro Cagra.3954s0012.1.p
IPR013750 InterPro Cagra.3954s0012.1.p
IPR012947 InterPro Cagra.3954s0012.1.p
PTHR11777 PANTHER Cagra.3954s0012.1.p
ALANINE--TRNA-LIGASE-RXN METACYC Cagra.3954s0012.1.p
TRNA-CHARGING-PWY Pathway Cagra.3954s0012.1.p
PTHR11777:SF14 PANTHER Cagra.3954s0012.1.p
IPR018164 InterPro Cagra.3954s0012.1.p
K01872 KEGG Cagra.3954s0012.1.p
IPR018165 InterPro Cagra.3954s0012.1.p
SM00863 SMART Cagra.3954s0012.1.p
PS50860 PROFILE Cagra.3954s0012.1.p
SSF50447 SSF Cagra.3954s0012.1.p
SSF101353 SSF Cagra.3954s0012.1.p
PF02272 PFAM Cagra.3954s0012.1.p

1 Pathway Components

Type Key Level Step
      84

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora TRNA-CHARGING-PWY Capsella grandiflora pathologic