Gene : Cagra.3960s0004 C. grandiflora v1.1
Defline:  (1 of 6) PTHR12042:SF18 - ALPHA 1,4-GLYCOSYLTRANSFERASE-LIKE PROTEIN Genomic Order:  4
Name:  ? Cagra.3960s0004 Secondary Identifier:  ? PAC:28896851
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.3960s0004 0.5kb upstream 0.5kb upstream 1826 true Scaffold3960: 21433-23258 Capsella grandiflora
Cagra.3960s0004 0.5kb upstream 0.5kb upstream 500 false Scaffold3960: 21433-21932 Capsella grandiflora
Cagra.3960s0004 0.5kb downstream 0.5kb downstream 1826 true Scaffold3960: 21933-23758 Capsella grandiflora
Cagra.3960s0004 0.5kb downstream 0.5kb downstream 500 false Scaffold3960: 23259-23758 Capsella grandiflora
Cagra.3960s0004 1.0kb upstream 1.0kb upstream 2326 true Scaffold3960: 20933-23258 Capsella grandiflora
Cagra.3960s0004 1.0kb upstream 1.0kb upstream 1000 false Scaffold3960: 20933-21932 Capsella grandiflora
Cagra.3960s0004 1.0kb downstream 1.0kb downstream 2326 true Scaffold3960: 21933-24258 Capsella grandiflora
Cagra.3960s0004 1.0kb downstream 1.0kb downstream 1000 false Scaffold3960: 23259-24258 Capsella grandiflora
Cagra.3960s0004 2.0kb upstream 2.0kb upstream 3326 true Scaffold3960: 19933-23258 Capsella grandiflora
Cagra.3960s0004 2.0kb upstream 2.0kb upstream 2000 false Scaffold3960: 19933-21932 Capsella grandiflora
Cagra.3960s0004 2.0kb downstream 2.0kb downstream 3326 true Scaffold3960: 21933-25258 Capsella grandiflora
Cagra.3960s0004 2.0kb downstream 2.0kb downstream 2000 false Scaffold3960: 23259-25258 Capsella grandiflora
Cagra.3960s0004 5.0kb upstream 5.0kb upstream 6326 true Scaffold3960: 16933-23258 Capsella grandiflora
Cagra.3960s0004 5.0kb upstream 5.0kb upstream 5000 false Scaffold3960: 16933-21932 Capsella grandiflora
Cagra.3960s0004 5.0kb downstream 5.0kb downstream 6326 true Scaffold3960: 21933-28258 Capsella grandiflora
Cagra.3960s0004 5.0kb downstream 5.0kb downstream 5000 false Scaffold3960: 23259-28258 Capsella grandiflora
Cagra.3960s0004 10.0kb upstream 10.0kb upstream 11326 true Scaffold3960: 11933-23258 Capsella grandiflora
Cagra.3960s0004 10.0kb upstream 10.0kb upstream 10000 false Scaffold3960: 11933-21932 Capsella grandiflora
Cagra.3960s0004 10.0kb downstream 10.0kb downstream 11326 true Scaffold3960: 21933-33258 Capsella grandiflora
Cagra.3960s0004 10.0kb downstream 10.0kb downstream 10000 false Scaffold3960: 23259-33258 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375175 5261 Brassicaceae View MSA
123831389 5264 Brassicales-Malvales View MSA
124338676 5266 SBM View MSA
124243190 5268 Malvidae View MSA
124061006 5270 Rosid View MSA
123741255 5271 Pentapetalae View MSA
122792990 5272 Eudicot View MSA
122047260 5273 Angiosperm View MSA
121347765 5274 Embryophyte View MSA
123425560 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain