Gene : Cagra.4091s0013 C. grandiflora v1.1
Defline:  (1 of 2) PTHR32382:SF15 - FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 3-RELATED Genomic Order:  13
Name:  ? Cagra.4091s0013 Secondary Identifier:  ? PAC:28900940
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.4091s0013 0.5kb upstream 0.5kb upstream 1343 true Scaffold4091: 52741-54083 Capsella grandiflora
Cagra.4091s0013 0.5kb upstream 0.5kb upstream 500 false Scaffold4091: 52741-53240 Capsella grandiflora
Cagra.4091s0013 0.5kb downstream 0.5kb downstream 1343 true Scaffold4091: 53241-54583 Capsella grandiflora
Cagra.4091s0013 0.5kb downstream 0.5kb downstream 500 false Scaffold4091: 54084-54583 Capsella grandiflora
Cagra.4091s0013 1.0kb upstream 1.0kb upstream 1843 true Scaffold4091: 52241-54083 Capsella grandiflora
Cagra.4091s0013 1.0kb upstream 1.0kb upstream 1000 false Scaffold4091: 52241-53240 Capsella grandiflora
Cagra.4091s0013 1.0kb downstream 1.0kb downstream 1843 true Scaffold4091: 53241-55083 Capsella grandiflora
Cagra.4091s0013 1.0kb downstream 1.0kb downstream 1000 false Scaffold4091: 54084-55083 Capsella grandiflora
Cagra.4091s0013 2.0kb upstream 2.0kb upstream 2843 true Scaffold4091: 51241-54083 Capsella grandiflora
Cagra.4091s0013 2.0kb upstream 2.0kb upstream 2000 false Scaffold4091: 51241-53240 Capsella grandiflora
Cagra.4091s0013 2.0kb downstream 2.0kb downstream 2843 true Scaffold4091: 53241-56083 Capsella grandiflora
Cagra.4091s0013 2.0kb downstream 2.0kb downstream 2000 false Scaffold4091: 54084-56083 Capsella grandiflora
Cagra.4091s0013 5.0kb upstream 5.0kb upstream 5843 true Scaffold4091: 48241-54083 Capsella grandiflora
Cagra.4091s0013 5.0kb upstream 5.0kb upstream 5000 false Scaffold4091: 48241-53240 Capsella grandiflora
Cagra.4091s0013 5.0kb downstream 5.0kb downstream 5843 true Scaffold4091: 53241-59083 Capsella grandiflora
Cagra.4091s0013 5.0kb downstream 5.0kb downstream 5000 false Scaffold4091: 54084-59083 Capsella grandiflora
Cagra.4091s0013 10.0kb upstream 10.0kb upstream 10843 true Scaffold4091: 43241-54083 Capsella grandiflora
Cagra.4091s0013 10.0kb upstream 10.0kb upstream 10000 false Scaffold4091: 43241-53240 Capsella grandiflora
Cagra.4091s0013 10.0kb downstream 10.0kb downstream 10843 true Scaffold4091: 53241-64083 Capsella grandiflora
Cagra.4091s0013 10.0kb downstream 10.0kb downstream 10000 false Scaffold4091: 54084-64083 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376298 5261 Brassicaceae View MSA
123834105 5264 Brassicales-Malvales View MSA
124337882 5266 SBM View MSA
124253242 5268 Malvidae View MSA
124069244 5270 Rosid View MSA
123749188 5271 Pentapetalae View MSA
122790622 5272 Eudicot View MSA
122051628 5273 Angiosperm View MSA
121351509 5274 Embryophyte View MSA
123426561 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain