Gene : Cagra.0495s0018 C. grandiflora v1.1
Defline:  (1 of 4) 3.5.4.5 - Cytidine deaminase / Cytosine nucleoside deaminase Genomic Order:  18
Name:  ? Cagra.0495s0018 Secondary Identifier:  ? PAC:28897077
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-6556 Capsella grandiflora pathologic  
Cgrandiflora PWY-7193 Capsella grandiflora pathologic  
Cgrandiflora PWY-7196 Capsella grandiflora pathologic  
Cgrandiflora PWY-7199 Capsella grandiflora pathologic  
Cgrandiflora PWY-7200 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0495s0018 0.5kb upstream 0.5kb upstream 1406 true Scaffold495: 71930-73335 Capsella grandiflora
Cagra.0495s0018 0.5kb upstream 0.5kb upstream 500 false Scaffold495: 72836-73335 Capsella grandiflora
Cagra.0495s0018 0.5kb downstream 0.5kb downstream 1406 true Scaffold495: 71430-72835 Capsella grandiflora
Cagra.0495s0018 0.5kb downstream 0.5kb downstream 500 false Scaffold495: 71430-71929 Capsella grandiflora
Cagra.0495s0018 1.0kb upstream 1.0kb upstream 1906 true Scaffold495: 71930-73835 Capsella grandiflora
Cagra.0495s0018 1.0kb upstream 1.0kb upstream 1000 false Scaffold495: 72836-73835 Capsella grandiflora
Cagra.0495s0018 1.0kb downstream 1.0kb downstream 1906 true Scaffold495: 70930-72835 Capsella grandiflora
Cagra.0495s0018 1.0kb downstream 1.0kb downstream 1000 false Scaffold495: 70930-71929 Capsella grandiflora
Cagra.0495s0018 2.0kb upstream 2.0kb upstream 2906 true Scaffold495: 71930-74835 Capsella grandiflora
Cagra.0495s0018 2.0kb upstream 2.0kb upstream 2000 false Scaffold495: 72836-74835 Capsella grandiflora
Cagra.0495s0018 2.0kb downstream 2.0kb downstream 2906 true Scaffold495: 69930-72835 Capsella grandiflora
Cagra.0495s0018 2.0kb downstream 2.0kb downstream 2000 false Scaffold495: 69930-71929 Capsella grandiflora
Cagra.0495s0018 5.0kb upstream 5.0kb upstream 5906 true Scaffold495: 71930-77835 Capsella grandiflora
Cagra.0495s0018 5.0kb upstream 5.0kb upstream 5000 false Scaffold495: 72836-77835 Capsella grandiflora
Cagra.0495s0018 5.0kb downstream 5.0kb downstream 5906 true Scaffold495: 66930-72835 Capsella grandiflora
Cagra.0495s0018 5.0kb downstream 5.0kb downstream 5000 false Scaffold495: 66930-71929 Capsella grandiflora
Cagra.0495s0018 10.0kb upstream 10.0kb upstream 10906 true Scaffold495: 71930-82835 Capsella grandiflora
Cagra.0495s0018 10.0kb upstream 10.0kb upstream 10000 false Scaffold495: 72836-82835 Capsella grandiflora
Cagra.0495s0018 10.0kb downstream 10.0kb downstream 10906 true Scaffold495: 61930-72835 Capsella grandiflora
Cagra.0495s0018 10.0kb downstream 10.0kb downstream 10000 false Scaffold495: 61930-71929 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122381221 5261 Brassicaceae View MSA
123839427 5264 Brassicales-Malvales View MSA
124337492 5266 SBM View MSA
124238889 5268 Malvidae View MSA
124068161 5270 Rosid View MSA
123744425 5271 Pentapetalae View MSA
122793352 5272 Eudicot View MSA
122048037 5273 Angiosperm View MSA
121343942 5274 Embryophyte View MSA
123424852 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain