Gene : Cagra.0569s0029 C. grandiflora v1.1
Defline:  (1 of 168) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Genomic Order:  29
Name:  ? Cagra.0569s0029 Secondary Identifier:  ? PAC:28894975
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0569s0029 0.5kb upstream 0.5kb upstream 2651 true Scaffold569: 133743-136393 Capsella grandiflora
Cagra.0569s0029 0.5kb upstream 0.5kb upstream 500 false Scaffold569: 135894-136393 Capsella grandiflora
Cagra.0569s0029 0.5kb downstream 0.5kb downstream 2651 true Scaffold569: 133243-135893 Capsella grandiflora
Cagra.0569s0029 0.5kb downstream 0.5kb downstream 500 false Scaffold569: 133243-133742 Capsella grandiflora
Cagra.0569s0029 1.0kb upstream 1.0kb upstream 3151 true Scaffold569: 133743-136893 Capsella grandiflora
Cagra.0569s0029 1.0kb upstream 1.0kb upstream 1000 false Scaffold569: 135894-136893 Capsella grandiflora
Cagra.0569s0029 1.0kb downstream 1.0kb downstream 3151 true Scaffold569: 132743-135893 Capsella grandiflora
Cagra.0569s0029 1.0kb downstream 1.0kb downstream 1000 false Scaffold569: 132743-133742 Capsella grandiflora
Cagra.0569s0029 2.0kb upstream 2.0kb upstream 4151 true Scaffold569: 133743-137893 Capsella grandiflora
Cagra.0569s0029 2.0kb upstream 2.0kb upstream 2000 false Scaffold569: 135894-137893 Capsella grandiflora
Cagra.0569s0029 2.0kb downstream 2.0kb downstream 4151 true Scaffold569: 131743-135893 Capsella grandiflora
Cagra.0569s0029 2.0kb downstream 2.0kb downstream 2000 false Scaffold569: 131743-133742 Capsella grandiflora
Cagra.0569s0029 5.0kb upstream 5.0kb upstream 7151 true Scaffold569: 133743-140893 Capsella grandiflora
Cagra.0569s0029 5.0kb upstream 5.0kb upstream 5000 false Scaffold569: 135894-140893 Capsella grandiflora
Cagra.0569s0029 5.0kb downstream 5.0kb downstream 7151 true Scaffold569: 128743-135893 Capsella grandiflora
Cagra.0569s0029 5.0kb downstream 5.0kb downstream 5000 false Scaffold569: 128743-133742 Capsella grandiflora
Cagra.0569s0029 10.0kb upstream 10.0kb upstream 12151 true Scaffold569: 133743-145893 Capsella grandiflora
Cagra.0569s0029 10.0kb upstream 10.0kb upstream 10000 false Scaffold569: 135894-145893 Capsella grandiflora
Cagra.0569s0029 10.0kb downstream 10.0kb downstream 12151 true Scaffold569: 123743-135893 Capsella grandiflora
Cagra.0569s0029 10.0kb downstream 10.0kb downstream 10000 false Scaffold569: 123743-133742 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377627 5261 Brassicaceae View MSA
123832249 5264 Brassicales-Malvales View MSA
124343694 5266 SBM View MSA
124241884 5268 Malvidae View MSA
124065827 5270 Rosid View MSA
123753301 5271 Pentapetalae View MSA
122789942 5272 Eudicot View MSA
122043539 5273 Angiosperm View MSA
121344903 5274 Embryophyte View MSA
123380125 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain