Gene : Cagra.0568s0107 C. grandiflora v1.1
Defline:  (1 of 18) KOG0005 - Ubiquitin-like protein Genomic Order:  107
Name:  ? Cagra.0568s0107 Secondary Identifier:  ? PAC:28911021
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0568s0107 0.5kb upstream 0.5kb upstream 746 true Scaffold568: 353036-353781 Capsella grandiflora
Cagra.0568s0107 0.5kb upstream 0.5kb upstream 500 false Scaffold568: 353036-353535 Capsella grandiflora
Cagra.0568s0107 0.5kb downstream 0.5kb downstream 746 true Scaffold568: 353536-354281 Capsella grandiflora
Cagra.0568s0107 0.5kb downstream 0.5kb downstream 500 false Scaffold568: 353782-354281 Capsella grandiflora
Cagra.0568s0107 1.0kb upstream 1.0kb upstream 1246 true Scaffold568: 352536-353781 Capsella grandiflora
Cagra.0568s0107 1.0kb upstream 1.0kb upstream 1000 false Scaffold568: 352536-353535 Capsella grandiflora
Cagra.0568s0107 1.0kb downstream 1.0kb downstream 1246 true Scaffold568: 353536-354781 Capsella grandiflora
Cagra.0568s0107 1.0kb downstream 1.0kb downstream 1000 false Scaffold568: 353782-354781 Capsella grandiflora
Cagra.0568s0107 2.0kb upstream 2.0kb upstream 2246 true Scaffold568: 351536-353781 Capsella grandiflora
Cagra.0568s0107 2.0kb upstream 2.0kb upstream 2000 false Scaffold568: 351536-353535 Capsella grandiflora
Cagra.0568s0107 2.0kb downstream 2.0kb downstream 2246 true Scaffold568: 353536-355781 Capsella grandiflora
Cagra.0568s0107 2.0kb downstream 2.0kb downstream 2000 false Scaffold568: 353782-355781 Capsella grandiflora
Cagra.0568s0107 5.0kb upstream 5.0kb upstream 5246 true Scaffold568: 348536-353781 Capsella grandiflora
Cagra.0568s0107 5.0kb upstream 5.0kb upstream 5000 false Scaffold568: 348536-353535 Capsella grandiflora
Cagra.0568s0107 5.0kb downstream 5.0kb downstream 5246 true Scaffold568: 353536-358781 Capsella grandiflora
Cagra.0568s0107 5.0kb downstream 5.0kb downstream 5000 false Scaffold568: 353782-358781 Capsella grandiflora
Cagra.0568s0107 10.0kb upstream 10.0kb upstream 10246 true Scaffold568: 343536-353781 Capsella grandiflora
Cagra.0568s0107 10.0kb upstream 10.0kb upstream 10000 false Scaffold568: 343536-353535 Capsella grandiflora
Cagra.0568s0107 10.0kb downstream 10.0kb downstream 10246 true Scaffold568: 353536-363781 Capsella grandiflora
Cagra.0568s0107 10.0kb downstream 10.0kb downstream 10000 false Scaffold568: 353782-363781 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122381650 5261 Brassicaceae View MSA
123803358 5264 Brassicales-Malvales View MSA
124300474 5266 SBM View MSA
124248161 5268 Malvidae View MSA
124050733 5270 Rosid View MSA
123751793 5271 Pentapetalae View MSA
122795699 5272 Eudicot View MSA
122050611 5273 Angiosperm View MSA
121312025 5274 Embryophyte View MSA
123425972 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain