Protein Family : ubiquitin family protein, putative, expressed 122050611

Method ID:  5273 Method Name:  Angiosperm
Sequence Alignment:  View MSA Member Count:  59

59 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
30174.t000439 (1 of 3) K12158 - ubiquitin-like protein Nedd8 (NEDD8) R. communis v0.1 333   30174: 2711775-2712107
orange1.1g032678m.g (1 of 2) KOG0003 - Ubiquitin/60s ribosomal protein L40 fusion C. sinensis v1.1 1929   scaffold00018: 250324-252252
AT1G11980 (1 of 4) K12158 - ubiquitin-like protein Nedd8 (NEDD8) A. thaliana TAIR10 RUB3 237   Chr1: 4045619-4045855
Thhalv10028259m.g (1 of 9) KOG0001//KOG0005 - Ubiquitin and ubiquitin-like proteins // Ubiquitin-like protein E. salsugineum v1.0 234   scaffold_14: 6520116-6520349
Thhalv10009383m.g (1 of 12) KOG0005 - Ubiquitin-like protein E. salsugineum v1.0 216   scaffold_5: 11500925-11501140
Ciclev10013083m.g (1 of 2) KOG0003 - Ubiquitin/60s ribosomal protein L40 fusion C. clementina v1.0 1912   scaffold_6: 20329967-20331878
Ciclev10010156m.g (1 of 33) PTHR10666 - UBIQUITIN C. clementina v1.0 225   scaffold_1: 19035358-19035582
Migut.D00042 (1 of 14) KOG0001//KOG0005 - Ubiquitin and ubiquitin-like proteins // Ubiquitin-like protein M. guttatus v2.0 1554   scaffold_4: 218597-220150
Migut.J00431 (1 of 29) PTHR10666 - UBIQUITIN M. guttatus v2.0 252   scaffold_10: 1915230-1915481
Araha.1853s0008 (1 of 2) KOG0003 - Ubiquitin/60s ribosomal protein L40 fusion A. halleri v1.1 1087   Scaffold1853: 40700-41786
Araha.44066s0001 (1 of 11) KOG0005 - Ubiquitin-like protein A. halleri v1.1 243   Scaffold44066: 340-582
Cagra.0568s0107 (1 of 18) KOG0005 - Ubiquitin-like protein C. grandiflora v1.1 246   Scaffold568: 353536-353781
Brara.D00581 (1 of 1) PF00240//PF01020 - Ubiquitin family (ubiquitin) // Ribosomal L40e family (Ribosomal_L40e) B. rapa FPsc v1.3 451   A04: 4476533-4476983
Brara.D00762 (1 of 19) KOG0005 - Ubiquitin-like protein B. rapa FPsc v1.3 234   A04: 6555416-6555649
Brara.F02025 (1 of 27) KOG0001 - Ubiquitin and ubiquitin-like proteins B. rapa FPsc v1.3 351   A06: 16864523-16864873
Medtr4g009980 (1 of 16) KOG0001//KOG0005 - Ubiquitin and ubiquitin-like proteins // Ubiquitin-like protein M. truncatula Mt4.0v1 275   chr4: 2166124-2166398
Medtr5g061310 (1 of 16) KOG0001//KOG0005 - Ubiquitin and ubiquitin-like proteins // Ubiquitin-like protein M. truncatula Mt4.0v1 413   chr5: 25477536-25477948
evm_27.TU.AmTr_v1.0_scaffold00027.40 (1 of 2) KOG0003 - Ubiquitin/60s ribosomal protein L40 fusion A. trichopoda v1.0 560   AmTr_v1.0_scaffold00027: 2013184-2013743
evm_27.TU.AmTr_v1.0_scaffold00101.25 (1 of 4) KOG0005 - Ubiquitin-like protein A. trichopoda v1.0 7224   AmTr_v1.0_scaffold00101: 511752-518975
Traes_2AL_0AD4C2794 (1 of 15) KOG0003 - Ubiquitin/60s ribosomal protein L40 fusion T. aestivum v2.2 829   ta_iwgsc_2al_v1_6438466: 1786-2614
Traes_7AS_1329D82C1 (1 of 51) KOG0001 - Ubiquitin and ubiquitin-like proteins T. aestivum v2.2 236   ta_iwgsc_7as_v1_4256694: 2971-3206
Eucgr.A01163 (1 of 18) KOG0001 - Ubiquitin and ubiquitin-like proteins E. grandis v2.0 452   Chr01: 24668675-24669126
Eucgr.K00415 (1 of 1) PF00240//PF01020 - Ubiquitin family (ubiquitin) // Ribosomal L40e family (Ribosomal_L40e) E. grandis v2.0 1283   Chr11: 3715018-3716300
GSMUA_AchrUn_randomG27420_001 (1 of 16) KOG0001 - Ubiquitin and ubiquitin-like proteins M. acuminata v1 870   chrUn_random: 133969874-133970743
GSMUA_Achr9G30160_001 (1 of 16) KOG0001 - Ubiquitin and ubiquitin-like proteins M. acuminata v1 461   chr9: 33541209-33541669
Kalax.0433s0015 (1 of 10) KOG0001//KOG0005 - Ubiquitin and ubiquitin-like proteins // Ubiquitin-like protein K. laxiflora v1.1 258   scaffold_433: 121396-121653
Bradi5g07198 (1 of 2) PF00240//PF01020 - Ubiquitin family (ubiquitin) // Ribosomal L40e family (Ribosomal_L40e) B. distachyon v3.1 420   Bd5: 9736517-9736936
Aqcoe7G059900 (1 of 21) KOG0001//KOG0005 - Ubiquitin and ubiquitin-like proteins // Ubiquitin-like protein A. coerulea v3.1 1488   Chr_07: 3632382-3633869
LOC_Os10g39590 (1 of 4) K12158 - ubiquitin-like protein Nedd8 (NEDD8) O. sativa v7.0 246   Chr10: 21162841-21163086
LOC_Os07g30990 (1 of 8) K02927 - large subunit ribosomal protein L40e (RP-L40e, RPL40) O. sativa v7.0 640   Chr7: 18355000-18355639

59 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
Thhalv10009383m E. salsugineum v1.0 122050611 ubiquitin family protein, putative, expressed 2 5273 Angiosperm
Migut.D00042.1.p M. guttatus v2.0 122050611 ubiquitin family protein, putative, expressed 2 5273 Angiosperm
Brara.D00762.1.p B. rapa FPsc v1.3 122050611 ubiquitin family protein, putative, expressed 3 5273 Angiosperm
Brara.F02025.1.p B. rapa FPsc v1.3 122050611 ubiquitin family protein, putative, expressed 3 5273 Angiosperm
Medtr5g061310.1 M. truncatula Mt4.0v1 122050611 ubiquitin family protein, putative, expressed 2 5273 Angiosperm
evm_27.model.AmTr_v1.0_scaffold00027.40 A. trichopoda v1.0 122050611 ubiquitin family protein, putative, expressed 2 5273 Angiosperm
evm_27.model.AmTr_v1.0_scaffold00101.25 A. trichopoda v1.0 122050611 ubiquitin family protein, putative, expressed 2 5273 Angiosperm
Traes_7AS_1329D82C1.1 T. aestivum v2.2 122050611 ubiquitin family protein, putative, expressed 2 5273 Angiosperm
Traes_2AL_0AD4C2794.1 T. aestivum v2.2 122050611 ubiquitin family protein, putative, expressed 2 5273 Angiosperm
Eucgr.A01163.1.p E. grandis v2.0 122050611 ubiquitin family protein, putative, expressed 2 5273 Angiosperm
GSMUA_AchrUn_randomP27420_001 M. acuminata v1 122050611 ubiquitin family protein, putative, expressed 2 5273 Angiosperm
GSMUA_Achr9P30160_001 M. acuminata v1 122050611 ubiquitin family protein, putative, expressed 2 5273 Angiosperm
Bradi5g07198.1.p B. distachyon v3.1 122050611 ubiquitin family protein, putative, expressed 1 5273 Angiosperm
Brast06G122000.1.p B. stacei v1.1 122050611 ubiquitin family protein, putative, expressed 1 5273 Angiosperm
Aqcoe7G059900.1.p A. coerulea v3.1 122050611 ubiquitin family protein, putative, expressed 1 5273 Angiosperm
LOC_Os10g39590.1 O. sativa v7.0 122050611 ubiquitin family protein, putative, expressed 3 5273 Angiosperm
LOC_Os07g30990.1 O. sativa v7.0 122050611 ubiquitin family protein, putative, expressed 3 5273 Angiosperm
LOC_Os05g38310.1 O. sativa v7.0 122050611 ubiquitin family protein, putative, expressed 3 5273 Angiosperm
Solyc11g005650.1.1 S. lycopersicum ITAG2.4 122050611 ubiquitin family protein, putative, expressed 1 5273 Angiosperm
AUR62023998-RA C. quinoa v1.0 122050611 ubiquitin family protein, putative, expressed 1 5273 Angiosperm
Pavir.1NG017000.1.p P. virgatum v4.1 122050611 ubiquitin family protein, putative, expressed 6 5273 Angiosperm
Sobic.010G040600.1.p S. bicolor v3.1.1 122050611 ubiquitin family protein, putative, expressed 1 5273 Angiosperm
MD07G1147200 M. domestica v1.1 122050611 ubiquitin family protein, putative, expressed 1 5273 Angiosperm
PhHAL.9G535800.1.p P. hallii HAL v2.1 122050611 ubiquitin family protein, putative, expressed 1 5273 Angiosperm
OsKitaake08g056000.1.p O. sativa Kitaake v3.1 122050611 ubiquitin family protein, putative, expressed 1 5273 Angiosperm
Sevir.8G101000.1.p S. viridis v2.1 122050611 ubiquitin family protein, putative, expressed 1 5273 Angiosperm
30174.m009042 R. communis v0.1 122050611 ubiquitin family protein, putative, expressed 1 5273 Angiosperm
orange1.1g032678m C. sinensis v1.1 122050611 ubiquitin family protein, putative, expressed 1 5273 Angiosperm
AT1G11980.1 A. thaliana TAIR10 122050611 ubiquitin family protein, putative, expressed 1 5273 Angiosperm
Thhalv10028259m E. salsugineum v1.0 122050611 ubiquitin family protein, putative, expressed 2 5273 Angiosperm