Gene : Eucgr.A01163 E. grandis v2.0
Defline:  (1 of 18) KOG0001 - Ubiquitin and ubiquitin-like proteins Genomic Order:  1090
Name:  ? Eucgr.A01163 Secondary Identifier:  ? PAC:32047704
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.A01163 0.5kb upstream 0.5kb upstream 952 true Chr01: 24668675-24669626 Eucalyptus grandis
Eucgr.A01163 0.5kb upstream 0.5kb upstream 500 false Chr01: 24669127-24669626 Eucalyptus grandis
Eucgr.A01163 0.5kb downstream 0.5kb downstream 952 true Chr01: 24668175-24669126 Eucalyptus grandis
Eucgr.A01163 0.5kb downstream 0.5kb downstream 500 false Chr01: 24668175-24668674 Eucalyptus grandis
Eucgr.A01163 1.0kb upstream 1.0kb upstream 1452 true Chr01: 24668675-24670126 Eucalyptus grandis
Eucgr.A01163 1.0kb upstream 1.0kb upstream 1000 false Chr01: 24669127-24670126 Eucalyptus grandis
Eucgr.A01163 1.0kb downstream 1.0kb downstream 1452 true Chr01: 24667675-24669126 Eucalyptus grandis
Eucgr.A01163 1.0kb downstream 1.0kb downstream 1000 false Chr01: 24667675-24668674 Eucalyptus grandis
Eucgr.A01163 2.0kb upstream 2.0kb upstream 2452 true Chr01: 24668675-24671126 Eucalyptus grandis
Eucgr.A01163 2.0kb upstream 2.0kb upstream 2000 false Chr01: 24669127-24671126 Eucalyptus grandis
Eucgr.A01163 2.0kb downstream 2.0kb downstream 2452 true Chr01: 24666675-24669126 Eucalyptus grandis
Eucgr.A01163 2.0kb downstream 2.0kb downstream 2000 false Chr01: 24666675-24668674 Eucalyptus grandis
Eucgr.A01163 5.0kb upstream 5.0kb upstream 5452 true Chr01: 24668675-24674126 Eucalyptus grandis
Eucgr.A01163 5.0kb upstream 5.0kb upstream 5000 false Chr01: 24669127-24674126 Eucalyptus grandis
Eucgr.A01163 5.0kb downstream 5.0kb downstream 5452 true Chr01: 24663675-24669126 Eucalyptus grandis
Eucgr.A01163 5.0kb downstream 5.0kb downstream 5000 false Chr01: 24663675-24668674 Eucalyptus grandis
Eucgr.A01163 10.0kb upstream 10.0kb upstream 10452 true Chr01: 24668675-24679126 Eucalyptus grandis
Eucgr.A01163 10.0kb upstream 10.0kb upstream 10000 false Chr01: 24669127-24679126 Eucalyptus grandis
Eucgr.A01163 10.0kb downstream 10.0kb downstream 10452 true Chr01: 24658675-24669126 Eucalyptus grandis
Eucgr.A01163 10.0kb downstream 10.0kb downstream 10000 false Chr01: 24658675-24668674 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124050733 5270 Rosid View MSA
123751793 5271 Pentapetalae View MSA
122795699 5272 Eudicot View MSA
122050611 5273 Angiosperm View MSA
121312025 5274 Embryophyte View MSA
123425972 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.17365 0.0 25.7537    
cufflinks 8.79266 0.0 25.0037    
cufflinks 8.37014 0.0 24.0076    
cufflinks 2.1513 0.0 7.35185   Low
cufflinks 1.64285 0.0 5.73597   Low
cufflinks 13.0007 0.0 35.1394    

0 Strain