Gene : evm_27.TU.AmTr_v1.0_scaffold00027.40 A. trichopoda v1.0
Defline:  (1 of 2) KOG0003 - Ubiquitin/60s ribosomal protein L40 fusion Genomic Order:  39
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00027.40 Secondary Identifier:  ? PAC:31551723
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00027.40 0.5kb upstream 0.5kb upstream 1060 true AmTr_v1.0_scaffold00027: 2012684-2013743 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00027.40 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00027: 2012684-2013183 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00027.40 0.5kb downstream 0.5kb downstream 1060 true AmTr_v1.0_scaffold00027: 2013184-2014243 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00027.40 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00027: 2013744-2014243 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00027.40 1.0kb upstream 1.0kb upstream 1560 true AmTr_v1.0_scaffold00027: 2012184-2013743 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00027.40 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00027: 2012184-2013183 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00027.40 1.0kb downstream 1.0kb downstream 1560 true AmTr_v1.0_scaffold00027: 2013184-2014743 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00027.40 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00027: 2013744-2014743 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00027.40 2.0kb upstream 2.0kb upstream 2560 true AmTr_v1.0_scaffold00027: 2011184-2013743 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00027.40 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00027: 2011184-2013183 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00027.40 2.0kb downstream 2.0kb downstream 2560 true AmTr_v1.0_scaffold00027: 2013184-2015743 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00027.40 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00027: 2013744-2015743 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00027.40 5.0kb upstream 5.0kb upstream 5560 true AmTr_v1.0_scaffold00027: 2008184-2013743 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00027.40 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00027: 2008184-2013183 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00027.40 5.0kb downstream 5.0kb downstream 5560 true AmTr_v1.0_scaffold00027: 2013184-2018743 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00027.40 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00027: 2013744-2018743 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00027.40 10.0kb upstream 10.0kb upstream 10560 true AmTr_v1.0_scaffold00027: 2003184-2013743 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00027.40 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00027: 2003184-2013183 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00027.40 10.0kb downstream 10.0kb downstream 10560 true AmTr_v1.0_scaffold00027: 2013184-2023743 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00027.40 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00027: 2013744-2023743 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122050611 5273 Angiosperm View MSA
121312025 5274 Embryophyte View MSA
123425972 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain