Gene : Medtr5g061310 M. truncatula Mt4.0v1
Defline:  (1 of 16) KOG0001//KOG0005 - Ubiquitin and ubiquitin-like proteins // Ubiquitin-like protein Description:  ubiquitin-40S ribosomal S27a-like protein
Genomic Order:  3270 Name:  ? Medtr5g061310
Secondary Identifier:  ? PAC:31085064
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g061310 0.5kb upstream 0.5kb upstream 913 true chr5: 25477036-25477948 Medicago truncatula
Medtr5g061310 0.5kb upstream 0.5kb upstream 500 false chr5: 25477036-25477535 Medicago truncatula
Medtr5g061310 0.5kb downstream 0.5kb downstream 913 true chr5: 25477536-25478448 Medicago truncatula
Medtr5g061310 0.5kb downstream 0.5kb downstream 500 false chr5: 25477949-25478448 Medicago truncatula
Medtr5g061310 1.0kb upstream 1.0kb upstream 1413 true chr5: 25476536-25477948 Medicago truncatula
Medtr5g061310 1.0kb upstream 1.0kb upstream 1000 false chr5: 25476536-25477535 Medicago truncatula
Medtr5g061310 1.0kb downstream 1.0kb downstream 1413 true chr5: 25477536-25478948 Medicago truncatula
Medtr5g061310 1.0kb downstream 1.0kb downstream 1000 false chr5: 25477949-25478948 Medicago truncatula
Medtr5g061310 2.0kb upstream 2.0kb upstream 2413 true chr5: 25475536-25477948 Medicago truncatula
Medtr5g061310 2.0kb upstream 2.0kb upstream 2000 false chr5: 25475536-25477535 Medicago truncatula
Medtr5g061310 2.0kb downstream 2.0kb downstream 2413 true chr5: 25477536-25479948 Medicago truncatula
Medtr5g061310 2.0kb downstream 2.0kb downstream 2000 false chr5: 25477949-25479948 Medicago truncatula
Medtr5g061310 5.0kb upstream 5.0kb upstream 5413 true chr5: 25472536-25477948 Medicago truncatula
Medtr5g061310 5.0kb upstream 5.0kb upstream 5000 false chr5: 25472536-25477535 Medicago truncatula
Medtr5g061310 5.0kb downstream 5.0kb downstream 5413 true chr5: 25477536-25482948 Medicago truncatula
Medtr5g061310 5.0kb downstream 5.0kb downstream 5000 false chr5: 25477949-25482948 Medicago truncatula
Medtr5g061310 10.0kb upstream 10.0kb upstream 10413 true chr5: 25467536-25477948 Medicago truncatula
Medtr5g061310 10.0kb upstream 10.0kb upstream 10000 false chr5: 25467536-25477535 Medicago truncatula
Medtr5g061310 10.0kb downstream 10.0kb downstream 10413 true chr5: 25477536-25487948 Medicago truncatula
Medtr5g061310 10.0kb downstream 10.0kb downstream 10000 false chr5: 25477949-25487948 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313750 5265 Fabidae View MSA
124050733 5270 Rosid View MSA
123751793 5271 Pentapetalae View MSA
122795699 5272 Eudicot View MSA
122050611 5273 Angiosperm View MSA
121312025 5274 Embryophyte View MSA
123425972 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain